RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PSMB5P28074 263 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CCL11P51671 97 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CDKN2DP55273 166 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ARL4CP56559 192 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 PDIA2Q13087 525 aaKnown RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 FRG1Q14331 258 aaKnown RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 FASTKD3Q14CZ7 662 aaKnown RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 SF1Q15637 639 aaKnown RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 TTLL9Q3SXZ7 439 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 DUPD1Q68J44 220 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 FIGLAQ6QHK4 219 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 KIAA0408Q6ZU52 694 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CEP97Q8IW35 865 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CPNE9Q8IYJ1 553 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 FDCSPQ8NFU4 85 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ASB11Q8WXH4 323 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 DLG3Q92796 817 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 MR1Q95460 341 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ZUFSPQ96AP4 578 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CFAP36Q96G28 342 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CCDC120Q96HB5 630 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 C18orf12Q96KH6 178 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 PKP4Q99569 1192 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 NDNQ99608 321 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 GPR87Q9BY21 358 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ENKD1Q9H0I2 346 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ING2Q9H160 280 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CHST8Q9H2A9 424 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CCDC68Q9H2F9 335 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ACTR5Q9H9F9 607 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 AGPAT4Q9NRZ5 378 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 SEMA3GQ9NS98 782 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF446Q9NWS9 450 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 EURLQ9NYK6 297 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 MOCS1Q9NZB8 636 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 GRHL1Q9NZI5 618 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 SPATA7Q9P0W8 599 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 WHRNQ9P202 907 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 FARSAQ9Y285 508 aaKnown RBP8.08□□□□□ -1.12
SSBP3-212ENST00000528930 KLK4Q9Y5K2 254 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ANK2Q01484 3957 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 SEC16AO15027 2179 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 HIVEP2P31629 2446 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 TARM1B6A8C7 271 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 E7ENX8 843 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 EIF3FO00303 357 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 NRP2O60462 931 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CTSVO60911 334 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 VPS26AO75436 327 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 OR2B3O76000 313 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 FKBP9O95302 570 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CATP04040 527 aaKnown RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 KLK3P07288 261 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 RAB40ALP0C0E4 278 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CBSLP0DN79 551 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ENO3P13929 434 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 MCM3P25205 808 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 PTPN4P29074 926 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CBSP35520 551 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 GRIA3P42263 894 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 SKIV2L2P42285 1042 aaKnown RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 MEOX1P50221 254 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 PGGT1BP53609 377 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 RPS18P62269 152 aaKnown RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ADAM8P78325 824 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 TAP2Q03519 686 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ARHGAP19Q14CB8 494 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 TRADDQ15628 312 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 UGT8Q16880 541 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 RHBDD2Q6NTF9 364 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 PAQR3Q6TCH7 311 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 FAM198BQ6UWH4 519 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 SUSD1Q6UWL2 747 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 RPTNQ6XPR3 784 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 PIWIL4Q7Z3Z4 852 aaKnown RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 MAATS1Q7Z4T9 603 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 MCATQ8IVS2 390 aaKnown RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 SYTL1Q8IYJ3 562 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 GPR135Q8IZ08 494 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 RAB42Q8N4Z0 105 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 BBOF1Q8ND07 529 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 FBXO36Q8NEA4 188 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 OR2L3Q8NG85 312 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF480Q8WV37 535 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 EEF1AKMT1Q8WVE0 214 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 SEC14L1Q92503 715 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CLIP3Q96DZ5 547 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF285Q96NJ3 590 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 MIPEPQ99797 713 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 DPH5Q9H2P9 285 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ACTL8Q9H568 366 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-212ENST00000528930 ADAMTS6Q9UKP5 1117 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms