RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CXCR2P25025 360 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 VARSP26640 1264 aaKnown RBP31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 AHRP35869 848 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 ATP6V0D1P61421 351 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 SLC7A5Q01650 507 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 CATSPEREQ5SY80 951 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 Q8NA96 180 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 KCT2Q8NC54 265 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 RHBDF1Q96CC6 855 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 MACROD1Q9BQ69 325 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 ZFP69BQ9UJL9 534 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 SLC22A14Q9Y267 594 aa31.3■■■□□ 2.6
SSSCA1-205ENST00000527920 LOC102723996A0A087X1L8 192 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 ESYT3A0FGR9 886 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 COX6A1P12074 109 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 IL1RNP18510 177 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 SCTRP47872 440 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 MAT1AQ00266 395 aaKnown RBP31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 REEP5Q00765 189 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 HERC3Q15034 1050 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 TGFBIQ15582 683 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 SYT16Q17RD7 645 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 AGAP7PQ5VUJ5 663 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 NIPAL1Q6NVV3 410 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 IGFL2Q6UWQ7 119 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 NDUFAF7Q7L592 441 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 PRSS41Q7RTY9 318 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 AFAP1L2Q8N4X5 818 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 CPT1CQ8TCG5 803 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 UBXN10Q96LJ8 280 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 TSNARE1Q96NA8 513 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 AGAP4Q96P64 663 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 MESP1Q9BRJ9 268 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 SLAMF7Q9NQ25 335 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 B3GNT3Q9Y2A9 372 aa31.29■■■□□ 2.6
SSSCA1-205ENST00000527920 PHGDHO43175 533 aaKnown RBP31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 ALOX12BO75342 701 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 CCDC166P0CW27 439 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 SLC6A12P48065 614 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 RAB10P61026 200 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 MEF2AQ02078 507 aaPredicted RBP31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 TMEM205Q6UW68 189 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 NXPE4Q6UWF7 544 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 ATCAYQ86WG3 371 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 TCAIMQ8N3R3 496 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 ZADH2Q8N4Q0 377 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 PPM1NQ8N819 430 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 NT5CQ8TCD5 201 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 FBF1Q8TES7 1133 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 C8orf44Q96CB5 159 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 AIF1LQ9BQI0 150 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 MKL2Q9ULH7 1088 aa31.28■■■□□ 2.6
SSSCA1-205ENST00000527920 NSG1A0A0A6YYJ2 146 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 NDUFS4O43181 175 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 SKP1P63208 163 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 Q0VFX4 171 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 PDSS2Q86YH6 399 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 PARP9Q8IXQ6 854 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 MMGT1Q8N4V1 131 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 EFCAB3Q8N7B9 438 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 ZNF740Q8NDX6 193 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 OR51Q1Q8NH59 317 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 ZCCHC10Q8TBK6 192 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 MFRPQ9BY79 579 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 ZNF160Q9HCG1 818 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 RIC8BQ9NVN3 520 aa31.27■■■□□ 2.6
SSSCA1-205ENST00000527920 IGHV1-45A0A0A0MS14 117 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 CD1DP15813 335 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 IL10P22301 178 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 GGT5P36269 586 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 RGS1Q08116 209 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 CEP128Q6ZU80 1094 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 TMPRSS11BQ86T26 416 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 KBTBD2Q8IY47 623 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 MNS1Q8NEH6 495 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 SPNS1Q9H2V7 528 aa31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 RP1L1Q8IWN7 2480 aaPredicted RBP31.26■■■□□ 2.59
SSSCA1-205ENST00000527920 SGK494L7N484 410 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 KLHL18O94889 574 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 GNAZP19086 355 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 XCR1P46094 333 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 Q6ZS92 163 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 GPSM1Q86YR5 675 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 GALNT11Q8NCW6 608 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 TRPV3Q8NET8 790 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 KIAA1191Q96A73 305 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 THOC3Q96J01 351 aaKnown RBP31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 CAPS2Q9BXY5 557 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 VN1R1Q9GZP7 353 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 ZNF700Q9H0M5 742 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 CNOT10Q9H9A5 744 aaKnown RBP31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 NAALAD2Q9Y3Q0 740 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 FLNCQ14315 2725 aa31.25■■■□□ 2.59
SSSCA1-205ENST00000527920 KIF2AO00139 706 aaPredicted RBP31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 WDR47O94967 919 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 INPP5JQ15735 1006 aaPredicted RBP31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 RIPOR1Q6ZS17 1223 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 RELL1Q8IUW5 271 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 SPATA6LQ8N4H0 392 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 PPP4R1Q8TF05 950 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms