RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TMEM214Q6NUQ4 689 aaKnown RBP21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 PAQR3Q6TCH7 311 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 ASPGQ86U10 573 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 SLC26A11Q86WA9 606 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 C2CD4AQ8NCU7 369 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 ZNF354BQ96LW1 612 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 SEC14L3Q9UDX4 400 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 SH2B3Q9UQQ2 575 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 CELSR2Q9HCU4 2923 aa21.14■□□□□ 0.97
TRAPPC4-208ENST00000527680 PRSS44E7EML9 344 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 SLC16A5O15375 505 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 HNRNPRO43390 633 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 CDH1P12830 882 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 AGTR2P50052 363 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 FCRLBQ6BAA4 426 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 PLAG1Q6DJT9 500 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 SRRM1Q8IYB3 904 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 SHISA5Q8N114 240 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 RELTQ969Z4 430 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 TM4SF19Q96DZ7 209 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 LINGO1Q96FE5 620 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 TRIM54Q9BYV2 358 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 FAM129AQ9BZQ8 928 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 PPANQ9NQ55 473 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 ABI3Q9P2A4 366 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 SUCOQ9UBS9 1254 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 NAALAD2Q9Y3Q0 740 aa21.13■□□□□ 0.97
TRAPPC4-208ENST00000527680 CPAMD8Q8IZJ3 1885 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 RDH16O75452 317 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 SERPIND1P05546 499 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 CYC1P08574 325 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 SLC35G6P0C7Q6 338 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 NPPBP16860 134 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 SP140Q13342 867 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 NAA30Q147X3 362 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 CRYMQ14894 314 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 NSDHLQ15738 373 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 ZNF766Q5HY98 468 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 ACER2Q5QJU3 275 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 LCTLQ6UWM7 567 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 ANKRD37Q7Z713 158 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 MARVELD3Q96A59 401 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 PEX11GQ96HA9 241 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 HAUS8Q9BT25 410 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 ARL15Q9NXU5 204 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 ASIC3Q9UHC3 531 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 MYO9AB2RTY4 2548 aa21.12■□□□□ 0.97
TRAPPC4-208ENST00000527680 CCL21O00585 134 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 OR1F1O43749 312 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 CDC123O75794 336 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 TTC4O95801 387 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 AHSGP02765 367 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 MST1P26927 711 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 FNTAP49354 379 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 CDKN2DP55273 166 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 IL2P60568 153 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 TIAL1Q01085 375 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 RBPJQ06330 500 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 DHX9Q08211 1270 aaKnown RBP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 PDAP1Q13442 181 aaKnown RBP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 SPANXN3Q5MJ09 141 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 RBM20Q5T481 1227 aaKnown RBP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 RNASEH2BQ5TBB1 312 aaKnown RBP21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 TBC1D19Q8N5T2 526 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 MFSD9Q8NBP5 474 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 RBCK1Q9BYM8 510 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 SH3BGRL2Q9UJC5 107 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 ENTPD4Q9Y227 616 aa21.11■□□□□ 0.97
TRAPPC4-208ENST00000527680 ZNF860A6NHJ4 632 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 BANF1O75531 89 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 GABRB3P28472 473 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 ST13P50502 369 aaKnown RBP21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 CCR8P51685 355 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 MEF2AQ02078 507 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 ABRAXAS2Q15018 415 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 HERC3Q15034 1050 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 EXT1Q16394 746 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 PHKG1Q16816 387 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 MEP1AQ16819 746 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 SFT2D3Q587I9 215 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 PCGF5Q86SE9 256 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 PDSS2Q86YH6 399 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 BEST3Q8N1M1 668 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 M1APQ8TC57 530 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 ACTRT1Q8TDG2 376 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 PYCR2Q96C36 320 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 SNF8Q96H20 258 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 OSBPL9Q96SU4 736 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 LPAR4Q99677 370 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 UTP23Q9BRU9 249 aaKnown RBP21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 NAT9Q9BTE0 207 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 SGPP1Q9BX95 441 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 RUBCNLQ9H714 662 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 ANKRD10Q9NXR5 420 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 SLC22A7Q9Y694 548 aa21.1■□□□□ 0.97
TRAPPC4-208ENST00000527680 TTI1O43156 1089 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 NDUFS4O43181 175 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 IL10P22301 178 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 CASP6P55212 293 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 PMP22Q01453 160 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms