RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 AIF1LQ9BQI0 150 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 CNOT10Q9H9A5 744 aaKnown RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 ANKHQ9HCJ1 492 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 C5AR2Q9P296 337 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 SLC22A7Q9Y694 548 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 TNRC6AQ8NDV7 1962 aaKnown RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 FFAR3O14843 346 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 GPR42O15529 346 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 WDR47O94967 919 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 SLC35E2BP0CK96 405 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 AHRP35869 848 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 GGT5P36269 586 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 GDF5P43026 501 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 SCTRP47872 440 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 REEP5Q00765 189 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 RAPSNQ13702 412 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 OR4D1Q15615 310 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 SYT16Q17RD7 645 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 C18orf21Q32NC0 220 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 TUBB8Q3ZCM7 444 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 VWA5B1Q5TIE3 1220 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 SULT1C3Q6IMI6 304 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 TMPRSS11BQ86T26 416 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 TBC1D1Q86TI0 1168 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 CAPS2Q9BXY5 557 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 FUT8Q9BYC5 575 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 TRIM4Q9C037 500 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 ACSS3Q9H6R3 686 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 NMRAL1Q9HBL8 299 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 ZFP69BQ9UJL9 534 aa24.99■■□□□ 1.59
TSPAN4-217ENST00000527644 IDSB3KWA1 339 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 MASP2O00187 686 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 PCDH17O14917 1159 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 NDUFS4O43181 175 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 DPM1O60762 260 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 IPO13O94829 963 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 IL1RNP18510 177 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 GNAZP19086 355 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 MAT1AQ00266 395 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 ATG9BQ674R7 924 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 PRSS41Q7RTY9 318 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 CCDC91Q7Z6B0 441 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 ZCCHC10Q8TBK6 192 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 STAG3L4Q8TBR4 150 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 MRRFQ96E11 262 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 SPNS1Q9H2V7 528 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 CDC42EP4Q9H3Q1 356 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 WWOXQ9NZC7 414 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 RNF112Q9ULX5 631 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 NUP210LQ5VU65 1888 aa24.98■■□□□ 1.59
TSPAN4-217ENST00000527644 MAP2K7O14733 419 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 TAPBPO15533 448 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ALPPP05187 535 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 HEXBP07686 556 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ACPPP15309 386 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ECHS1P30084 290 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 RGS1Q08116 209 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 HERC3Q15034 1050 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 MROH9Q5TGP6 573 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ZC3H7AQ8IWR0 971 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 PDPRQ8NCN5 879 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 NT5CQ8TCD5 201 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 TMEM79Q9BSE2 394 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ZNF552Q9H707 407 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 GPRC5BQ9NZH0 403 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 CD274Q9NZQ7 290 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 ACOT9Q9Y305 439 aa24.97■■□□□ 1.59
TSPAN4-217ENST00000527644 SGK494L7N484 410 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 H2AFYO75367 372 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 WISP1O95388 367 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 BMP10O95393 424 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 S100BP04271 92 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 SERPIND1P05546 499 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 LTA4HP09960 611 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 C1GALT1C1LP0DN25 315 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 CXCR2P25025 360 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 ITGA3P26006 1051 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 DLG1Q12959 904 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 CDC16Q13042 620 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 COLEC12Q5KU26 742 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 ISCA2Q86U28 154 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 AFAP1L2Q8N4X5 818 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 TRPV3Q8NET8 790 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 OR51Q1Q8NH59 317 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 MOCOSQ96EN8 888 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 IGSF5Q9NSI5 407 aa24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 PTBP2Q9UKA9 531 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-217ENST00000527644 A0A087X1B8 175 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 HMX2A2RU54 273 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 PYCARD-AS1I3L0S3 204 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 STK16O75716 305 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 KLHL18O94889 574 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 ACSL3O95573 720 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 HPP00738 406 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 TFEBP19484 476 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 VARSP26640 1264 aaKnown RBP24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 GMPRP36959 345 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 KCNC1P48547 511 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 BMPR2Q13873 1038 aa24.95■■□□□ 1.58
TSPAN4-217ENST00000527644 RBBP5Q15291 538 aaKnown RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms