RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 LAIR2Q6ISS4 152 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RGS7BPQ6MZT1 257 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 FDX2Q6P4F2 183 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NOTUMQ6P988 496 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 KLHL17Q6TDP4 642 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MFSD7Q6UXD7 560 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PAMR1Q6UXH9 720 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 DLEU7Q6UYE1 221 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ETV3LQ6ZN32 361 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 C17orf107Q6ZR85 190 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ADGRD2Q7Z7M1 963 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TAC4Q86UU9 113 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CLEC10AQ8IUN9 316 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SKA3Q8IX90 412 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RIMKLAQ8IXN7 391 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CENPLQ8N0S6 344 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 NAGSQ8N159 534 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 OXR1Q8N573 874 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MS4A15Q8N5U1 240 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TEX19Q8NA77 164 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 BVESQ8NE79 360 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 OR8D4Q8NGM9 314 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 OR2T4Q8NH00 348 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 AKR7LQ8NHP1 331 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 BTN2A2Q8WVV5 523 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NTAN1Q96AB6 310 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CREB3L1Q96BA8 519 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 COQ8BQ96D53 544 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NARS2Q96I59 477 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 CCDC17Q96LX7 622 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NSMCE2Q96MF7 247 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 Q96MT0 163 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ERMAPQ96PL5 475 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 PFDN5Q99471 154 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NEU1Q99519 415 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 FAM83CQ9BQN1 747 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SPON2Q9BUD6 331 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RUSC1Q9BVN2 902 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ERVK-6Q9BXR3 956 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TRIM54Q9BYV2 358 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CPEB1Q9BZB8 566 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 NKX6-2Q9C056 277 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 MS4A7Q9GZW8 240 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 MIXL1Q9H2W2 232 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 FN3KQ9H479 309 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 DDX31Q9H8H2 851 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 UNKLQ9H9P5 680 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 CARS2Q9HA77 564 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 SEBOXQ9HB31 216 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 ARNT2Q9HBZ2 717 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 GLOD4Q9HC38 313 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MRPS30Q9NP92 439 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 XPNPEP3Q9NQH7 507 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 C19orf12Q9NSK7 152 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 DMAC2Q9NW81 257 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RBFOX1Q9NWB1 397 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 MED11Q9P086 117 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PIM2Q9P1W9 311 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PAK5Q9P286 719 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ZNF624Q9P2J8 865 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 ASH2LQ9UBL3 628 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 AFF4Q9UHB7 1163 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 OGDHLQ9ULD0 1010 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SSR3Q9UNL2 185 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SLC6A5Q9Y345 797 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SAMHD1Q9Y3Z3 626 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 KLK4Q9Y5K2 254 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 V9GYH0 126 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 BAZ2AQ9UIF9 1905 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 PTPRJQ12913 1337 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 COL24A1Q17RW2 1714 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MAST2Q6P0Q8 1798 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 A0A1B0GV90 55 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ANKDD1BA6NHY2 528 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ARHGEF33A8MVX0 844 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 G3V2L1 256 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 G3V2T6 193 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 M0R233 179 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CBX4O00257 560 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 DFFAO00273 331 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 POLRMTO00411 1230 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 NME4O00746 187 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SDHDO14521 159 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PDCD5O14737 125 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FPGTO14772 594 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PPEF2O14830 753 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PER2O15055 1255 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 UBDO15205 165 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CLIC2O15247 247 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 INPP4BO15327 924 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FABP7O15540 132 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 TGFB1I1O43294 461 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 VEGFDO43915 354 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 NPHS1O60500 1241 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PEX10O60683 326 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FAM20BO75063 409 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CABYRO75952 493 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FADS2O95864 444 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 CBX7O95931 251 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PAK4O96013 591 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms