RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CTSBP07858 339 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 UQCRHP07919 91 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NUDT17P0C025 328 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MYZAPP0CAP1 466 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PYGBP11216 843 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCNAP12004 261 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 EEF1DP29692 281 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 OTX2P32243 289 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GMPRP36959 345 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 HNF4AP41235 474 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SCTRP47872 440 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR1D4P47884 311 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCT5P48643 541 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCNG1P51959 295 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 RPS18P62269 152 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHIT1Q13231 466 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SRSF6Q13247 344 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GTF2H2Q13888 395 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 RCN2Q14257 317 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NAA30Q147X3 362 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TBCCQ15814 346 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 RBBP7Q16576 425 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 HKDC1Q2TB90 917 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 DEFB109BQ30KR1 87 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 C18orf21Q32NC0 220 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 FBXO48Q5FWF7 155 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MFSD4BQ5TF39 518 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF385CQ66K41 422 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TTC19Q6DKK2 380 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM214Q6NUQ4 689 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GTF2H2CQ6P1K8 395 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MED27Q6P2C8 311 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRIM40Q6P9F5 258 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF517Q6ZMY9 492 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLCO4C1Q6ZQN7 724 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 OVCH1Q7RTY7 1134 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC22A9Q8IVM8 553 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTGR2Q8N8N7 351 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SRFBP1Q8NEF9 429 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4K1Q8NGD4 311 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR2Y1Q8NGV0 311 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NT5CQ8TCD5 201 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPS8L3Q8TE67 593 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SREK1Q8WXA9 508 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MIEF2Q96C03 454 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCDC126Q96EE4 140 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PHF21BQ96EK2 531 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CRELD1Q96HD1 420 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAR2Q96K12 515 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 C10orf90Q96M02 699 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 FER1L6-AS2Q96M78 137 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 RUFY1Q96T51 708 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 CRB3Q9BUF7 120 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SARGQ9BW04 601 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ROPN1BQ9BZX4 212 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 STMN4Q9H169 189 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NT5DC2Q9H857 520 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 COPS7BQ9H9Q2 264 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ROPN1Q9HAT0 212 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MKKSQ9NPJ1 570 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACSS2Q9NR19 701 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ENAMQ9NRM1 1142 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SEMA3GQ9NS98 782 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GEMIN8Q9NWZ8 242 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADGRE2Q9UHX3 823 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GRID1Q9ULK0 1009 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 STK38LQ9Y2H1 464 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAP4K5Q9Y4K4 846 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MRPS18BQ9Y676 258 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC22A7Q9Y694 548 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAU2Q9Y6X3 613 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 IGF2RP11717 2491 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADAMTS20P59510 1910 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCDC151A5D8V7 595 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GOLGA6L10A6NI86 522 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MKRN2OSH3BPM6 223 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAP2K7O14733 419 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 TERTO14746 1132 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATXN7O15265 892 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 P2RX6O15547 441 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 B3GALT2O43825 422 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLK8O60259 260 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CRCPO75575 148 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLEC3AO75596 197 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 RFPL1O75677 317 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLHL18O94889 574 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLDN9O95484 217 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MLYCDO95822 493 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ONECUT2O95948 504 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 OTCP00480 354 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ALPPP05187 535 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 HEXBP07686 556 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SERPINA6P08185 405 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CYC1P08574 325 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF888P0CJ79 500 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MYL2P10916 166 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACPPP15309 386 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ALOX12P18054 663 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 IL1RNP18510 177 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms