RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 RBM41Q96IZ5 413 aaKnown RBP6.65□□□□□ -1.34
CASP4-205ENST00000525116 CNDP1Q96KN2 507 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 IP6K3Q96PC2 410 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 GBP5Q96PP8 586 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 TRAPPC9Q96Q05 1148 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 SPATA25Q9BR10 227 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 FAM96AQ9H5X1 160 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 SYTL2Q9HCH5 934 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 IRAK4Q9NWZ3 460 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 IL17CQ9P0M4 197 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 ITGB1BP2Q9UKP3 347 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 PKP3Q9Y446 797 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 BZW2Q9Y6E2 419 aaKnown RBP6.65□□□□□ -1.34
CASP4-205ENST00000525116 POLQO75417 2590 aa6.65□□□□□ -1.34
CASP4-205ENST00000525116 PIKFYVEQ9Y2I7 2098 aa6.65□□□□□ -1.35
CASP4-205ENST00000525116 DCHS2Q6V1P9 2916 aa6.65□□□□□ -1.35
CASP4-205ENST00000525116 ZFHX3Q15911 3703 aa6.65□□□□□ -1.35
CASP4-205ENST00000525116 SPTBP11277 2137 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 LOC285095A0A1B0GVY8 99 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 MATN2O00339 956 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 GAPDHSO14556 408 aaPredicted RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 STX7O15400 261 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 HCRTR1O43613 425 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 B3GALT2O43825 422 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 KLHL41O60662 606 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 CNOT3O75175 753 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 TUSC2O75896 110 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 SERPINC1P01008 464 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 GASTP01350 101 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 IGHEP01854 428 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 SERPING1P05155 500 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 GYPEP15421 78 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 RHCEP18577 417 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 PTPN3P26045 913 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 NDUFS1P28331 727 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 DCDP81605 110 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 ITGA9Q13797 1035 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 TEX44Q53QW1 395 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 ODF2Q5BJF6 829 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 ZDHHC20Q5W0Z9 365 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 SLC9A4Q6AI14 798 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 KDELC1Q6UW63 502 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 LARP4Q71RC2 724 aaKnown RBP eCLIP6.64□□□□□ -1.35
CASP4-205ENST00000525116 AMIGO1Q86WK6 493 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 IPMKQ8NFU5 416 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 OR52E1Q8NGJ3 308 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 OR2Y1Q8NGV0 311 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 PTERQ96BW5 349 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 MTFMTQ96DP5 389 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 DCUN1D1Q96GG9 259 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 LCORQ96JN0 433 aaPredicted RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 BARD1Q99728 777 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 WDR77Q9BQA1 342 aaPredicted RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 C17orf62Q9BQA9 187 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 CCM2Q9BSQ5 444 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 PACSIN1Q9BY11 444 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 PITPNM3Q9BZ71 974 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 NAT10Q9H0A0 1025 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 TRABDQ9H4I3 376 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 ASB8Q9H765 288 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 BCO1Q9HAY6 547 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 LANCL2Q9NS86 450 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 TXLNGQ9NUQ3 528 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 COPG2Q9UBF2 871 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 DHCR7Q9UBM7 475 aaKnown RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 FAM153AQ9UHL3 310 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 FBXL4Q9UKA2 621 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 HEBP2Q9Y5Z4 205 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 SETD2Q9BYW2 2564 aaPredicted RBP6.64□□□□□ -1.35
CASP4-205ENST00000525116 NF1P21359 2839 aa6.64□□□□□ -1.35
CASP4-205ENST00000525116 CCDC78A2IDD5 438 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 C3orf70A6NLC5 250 aaPredicted RBP6.63□□□□□ -1.35
CASP4-205ENST00000525116 SMTNL1A8MU46 457 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 C2orf74A8MZ97 194 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 E2F3O00716 465 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 AGTP01019 485 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 HRGP04196 525 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 KRT1P04264 644 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 JUNP05412 331 aaKnown RBP6.63□□□□□ -1.35
CASP4-205ENST00000525116 UMODP07911 640 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 H2AFZP0C0S5 128 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 ZFXP17010 805 aaPredicted RBP6.63□□□□□ -1.35
CASP4-205ENST00000525116 PDHA2P29803 388 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 CRHR1P34998 444 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 KIR2DL3P43628 341 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 DUSP2Q05923 314 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 WASHC5Q12768 1159 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 ZNF169Q14929 603 aaPredicted RBP6.63□□□□□ -1.35
CASP4-205ENST00000525116 SLC1A5Q15758 541 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 ZIC1Q15915 447 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 ZXDCQ2QGD7 858 aaPredicted RBP6.63□□□□□ -1.35
CASP4-205ENST00000525116 NKAIN1Q4KMZ8 207 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 BCL7AQ4VC05 210 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 AGAP7PQ5VUJ5 663 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 IRAK1BP1Q5VVH5 260 aa6.63□□□□□ -1.35
CASP4-205ENST00000525116 DARS2Q6PI48 645 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms