RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 WSB2Q9NYS7 404 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 SEPT10Q9P0V9 454 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FAF1Q9UNN5 650 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 PYGO1Q9Y3Y4 419 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 LOXL2Q9Y4K0 774 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 YIPF1Q9Y548 306 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 KLF2Q9Y5W3 355 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 DDX49Q9Y6V7 483 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CROCCQ5TZA2 2017 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TDRD15B5MCY1 1934 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 BAZ2AQ9UIF9 1905 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 PLXNB3Q9ULL4 1909 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FBN1P35555 2871 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 PRRC2CQ9Y520 2896 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 MXRA5Q9NR99 2828 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ANK1P16157 1881 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 MUC22E2RYF6 1773 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 BAZ2BQ9UIF8 2168 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 STK36Q9NRP7 1315 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 VWA8A3KMH1 1905 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 A0A1W2PQF6 199 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ERICH2A1L162 156 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 K7EQS6 105 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PRRG1O14668 218 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PTGESO14684 152 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NVLO15381 856 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 CCL16O15467 120 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SLC7A4O43246 635 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TIMM44O43615 452 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CYTH3O43739 400 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CACNG3O60359 315 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NMT2O60551 498 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NOL4O94818 638 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 STBD1O95210 358 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NADKO95544 446 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 EGFP01133 1207 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 VTNP04004 478 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 APODP05090 189 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 GCFC2P16383 781 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 GJA1P17302 382 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 BCKDHBP21953 392 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 RRM1P23921 792 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CD27P26842 260 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 EPHA8P29322 1005 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 MARCKSP29966 332 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 GNA11P29992 359 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 OR1D2P34982 312 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CA8P35219 290 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 OPRD1P41143 372 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 MAGEA11P43364 429 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 LEPRP48357 1165 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 DHPSP49366 369 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 CLDN20P56880 219 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 KRTAP12-2P59991 146 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 EEF1A1P68104 462 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 IRX1P78414 480 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 MC1RQ01726 317 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PRKCEQ02156 737 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 MBTD1Q05BQ5 628 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 KLRB1Q12918 225 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 BFSP1Q12934 665 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PPP2R5CQ13362 524 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ORC2Q13416 577 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 LY6DQ14210 128 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 MTF1Q14872 753 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ANKRD1Q15327 319 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 IMMTQ16891 758 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 ALG11Q2TAA5 492 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 HLA-BQ31612 363 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 LINC00303Q3SY05 128 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 FHL5Q5TD97 284 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 HES3Q5TGS1 186 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 EEF1A1P5Q5VTE0 462 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CENPPQ6IPU0 288 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 LCN10Q6JVE6 187 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 DUS1LQ6P1R4 473 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 CD300LGQ6UXG3 332 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PQLC2Q6ZP29 291 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 Q75L30 129 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 OTUD6AQ7L8S5 288 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SLC46A3Q7Z3Q1 461 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SH2D6Q7Z4S9 175 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ADGRG6Q86SQ4 1221 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TDRPQ86YL5 185 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CCDC83Q8IWF9 413 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SPAG16Q8N0X2 631 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 METTL13Q8N6R0 699 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 STPG4Q8N801 248 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ACBD4Q8NC06 268 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 C11orf65Q8NCR3 313 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 VPS37AQ8NEZ2 397 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 OR6C4Q8NGE1 309 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 WDR36Q8NI36 951 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 WDR20Q8TBZ3 569 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SLC38A5Q8WUX1 472 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TM9SF4Q92544 642 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 MRPS31Q92665 395 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 NAT6Q93015 286 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TAAR8Q969N4 342 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TBC1D20Q96BZ9 403 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms