RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	ZNF740	Q8NDX6	193 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SPATA4	Q8NEY3	305 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	DNAJB14	Q8TBM8	379 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ANKRD49	Q8WVL7	239 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SLC13A3	Q8WWT9	602 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ANKRD7	Q92527	254 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	NEIL2	Q969S2	332 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	MOCOS	Q96EN8	888 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	IMMP1L	Q96LU5	166 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	LMF1	Q96S06	567 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ERP44	Q9BS26	406 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	TRIM54	Q9BYV2	358 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	VN1R1	Q9GZP7	353 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SPNS1	Q9H2V7	528 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	GRHL1	Q9NZI5	618 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	MAP10	Q9P2G4	905 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	COPG1	Q9Y678	874 aa	Known RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	NAV2	Q8IVL1	2488 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	TRBC2	A0A5B9	178 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	BLACE	A4D250	179 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CTAGE15	A4D2H0	777 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	OR2W5	A6NFC9	320 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CXorf49	A8MYA2	514 aa	Predicted RBP	11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	PCDH17	O14917	1159 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	RAD51C	O43502	376 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	WISP3	O95389	354 aa	Predicted RBP	11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	C1QA	P02745	245 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SERPINA7	P05543	415 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	RNF224	P0DH78	156 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SAT1	P21673	171 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CXCR2	P25025	360 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SSTR1	P30872	391 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SOX11	P35716	441 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	GLRB	P48167	497 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CCR8	P51685	355 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	NR6A1	Q15406	480 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	FHL5	Q5TD97	284 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	LINC00696	Q6ZRV3	163 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CTAGE6	Q86UF2	777 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	AFAP1L2	Q8N4X5	818 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CATSPER1	Q8NEC5	780 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	OR51Q1	Q8NH59	317 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	ZCCHC10	Q8TBK6	192 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	BRIX1	Q8TDN6	353 aa	Known RBP	11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	ATL1	Q8WXF7	558 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	VPS39	Q96JC1	886 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	CYTH2	Q99418	400 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SLC29A3	Q9BZD2	475 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	FAM129A	Q9BZQ8	928 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	DPH5	Q9H2P9	285 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	RHOJ	Q9H4E5	214 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	HCN3	Q9P1Z3	774 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	WHRN	Q9P202	907 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	SLC22A7	Q9Y694	548 aa		11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
VEGFA-223	ENST00000523125	POLE	Q07864	2286 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	NPEPPSL1	A6NEC2	478 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	FAM187A	A6NFU0	413 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	OR1F1	O43749	312 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	DNAJB6	O75190	326 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	RDH16	O75452	317 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	C8orf89	P0DMQ9	161 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	ITGAM	P11215	1152 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	GP1BB	P13224	206 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	GRK3	P35626	688 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	TSFM	P43897	325 aa	Known RBP	11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	XCR1	P46094	333 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	C2orf54	Q08AI8	447 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	ZNF169	Q14929	603 aa	Predicted RBP	11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	RIPOR1	Q6ZS17	1223 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	CAPN12	Q6ZSI9	719 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	LANCL3	Q6ZV70	420 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	THOC6	Q86W42	341 aa	Known RBP	11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	NKAP	Q8N5F7	415 aa	Known RBP	11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	SIRT6	Q8N6T7	355 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	ANKRD53	Q8N9V6	530 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	BBOF1	Q8ND07	529 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	PYROXD1	Q8WU10	500 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	SLC5A11	Q8WWX8	675 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	TSNARE1	Q96NA8	513 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	EPS8L2	Q9H6S3	715 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	ANKH	Q9HCJ1	492 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	LANCL2	Q9NS86	450 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	RIC8B	Q9NVN3	520 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	PTGFRN	Q9P2B2	879 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	MTO1	Q9Y2Z2	717 aa	Known RBP	11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	NAALAD2	Q9Y3Q0	740 aa		11.69	□□□□□ -0.54
VEGFA-223	ENST00000523125	CELSR2	Q9HCU4	2923 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	IGHV3-20	A0A0C4DH32	117 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	PABPN1L	A6NDY0	278 aa	Known RBP	11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	ZNF860	A6NHJ4	632 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	NDC80	O14777	642 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	NDUFS4	O43181	175 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	GALR3	O60755	368 aa	Predicted RBP	11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	AGFG2	O95081	481 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	B3GALT4	O96024	378 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	CYC1	P08574	325 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	SLC35G6	P0C7Q6	338 aa		11.68	□□□□□ -0.54
VEGFA-223	ENST00000523125	SCTR	P47872	440 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms