RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 THAP5Q7Z6K1 395 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CROCCP2Q86T23 111 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GPAT4Q86UL3 456 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM17Q86X19 198 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GPALPP1Q8IXQ4 340 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 FAM185AQ8N0U4 392 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MARVELD2Q8N4S9 558 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MMGT1Q8N4V1 131 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 POU5F2Q8N7G0 328 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 OR14C36Q8NHC7 312 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SLC35G2Q8TBE7 412 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ELMO1Q92556 727 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 RSC1A1Q92681 617 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 EXOSC8Q96B26 276 aaKnown RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 C10orf90Q96M02 699 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TAAR9Q96RI9 348 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 FAM129BQ96TA1 746 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACO2Q99798 780 aaKnown RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MND1Q9BWT6 205 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 NLNQ9BYT8 704 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 LRRN3Q9H3W5 708 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SMYD3Q9H7B4 428 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TMBIM4Q9HC24 238 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ABCC13Q9NSE7 274 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CCM2LQ9NUG4 571 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MED17Q9NVC6 651 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GRHL1Q9NZI5 618 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ERVK-18Q9QC07 812 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 FBXW11Q9UKB1 542 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PSMD13Q9UNM6 376 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SNX24Q9Y343 169 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PCDHGB1Q9Y5G3 927 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 BACE2Q9Y5Z0 518 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 A0A1B0GV90 55 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 C9orf170A2RU37 121 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ISPDA4D126 451 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CASTOR2A6NHX0 329 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CENPXA8MT69 81 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 RBAK-RBAKDNI3L0D1 243 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 I3L4J1 428 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TLR4O00206 839 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ARHGEF9O43307 516 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TGM5O43548 720 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 DTNBO60941 627 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CNTN5O94779 1100 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NXPH2O95156 264 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TNFAIP8O95379 198 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SMIM18P0DKX4 95 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ARAFP10398 606 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 BRAFP15056 766 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 KCNE1P15382 129 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 PSMC3P17980 439 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ERCC2P18074 760 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 FGFR3P22607 806 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 PROZP22891 400 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 DTYMKP23919 212 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 UGT1A3P35503 534 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 RGS6P49758 472 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SERPINH1P50454 418 aaKnown RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 HLCSP50747 726 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CLCN7P51798 805 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 GPR143P51810 404 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 GPLD1P80108 840 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TNFRSF17Q02223 184 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NPRL3Q12980 569 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MAPK7Q13164 816 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SLAQ13239 276 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SEMA5AQ13591 1074 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 APOFQ13790 326 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 GPR176Q14439 515 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF846Q147U1 533 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 HEPACAMQ14CZ8 416 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TSTQ16762 297 aaKnown RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 UPP1Q16831 310 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 BTBD16Q32M84 506 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NADK2Q4G0N4 442 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TAF1BQ53T94 588 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ACTBL2Q562R1 376 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 COQ5Q5HYK3 327 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SEL1L2Q5TEA6 688 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 HGSNATQ68CP4 663 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SEL1L3Q68CR1 1132 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 RNF43Q68DV7 783 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ETFRF1Q6IPR1 90 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MTFR2Q6P444 385 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM65Q6PI78 240 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 PRSS57Q6UWY2 283 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 USP49Q70CQ1 688 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF572Q7Z3I7 529 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 REC114Q7Z4M0 266 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CNTN4Q8IWV2 1026 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 DSELQ8IZU8 1212 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 GCNT2Q8N0V5 402 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms