RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SAT1P21673 171 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 HNF4AP41235 474 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 RGS1Q08116 209 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 HYAL2Q12891 473 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 GRHL2Q6ISB3 625 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TTLL10Q6ZVT0 673 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 AMER3Q8N944 861 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 RDH11Q8TC12 318 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 KCTD4Q8WVF5 259 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 ACAT2Q9BWD1 397 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 ROGDIQ9GZN7 287 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 AKIRIN1Q9H9L7 192 aaPredicted RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 STARD5Q9NSY2 213 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 CD274Q9NZQ7 290 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 C5AR2Q9P296 337 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 DCDC2Q9UHG0 476 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 KNTC1P50748 2209 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TRIM49D1C9J1S8 452 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 H0YIV9 168 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 NKX2-8O15522 239 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 LCMT2O60294 686 aaKnown RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 CNOT3O75175 753 aaKnown RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 WDR47O94967 919 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 GUCA1CO95843 209 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 UMODP07911 640 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 FBLP22087 321 aaKnown RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 PIK3CBP42338 1070 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 PGGT1BP53609 377 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 AP2B1P63010 937 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TMEM35AQ53FP2 167 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TEX35Q5T0J7 233 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 TMEM205Q6UW68 189 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 ABHD13Q7L211 337 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 SLC13A3Q8WWT9 602 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 FER1L6-AS2Q96M78 137 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 NTMT1Q9BV86 223 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 MRPL46Q9H2W6 279 aaKnown RBP8.99□□□□□ -0.97
CLK4-209ENST00000521621 ALG9Q9H6U8 611 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 ABCF3Q9NUQ8 709 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 HEATR5BQ9P2D3 2071 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 GALR3O60755 368 aaPredicted RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 PIAS1O75925 651 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 STXBP1P61764 594 aaKnown RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 IRF9Q00978 393 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 IL10RAQ13651 578 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 BMPR2Q13873 1038 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 UAP1Q16222 522 aaPredicted RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 PRAMEF17Q5VTA0 474 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 FAM199XQ6PEV8 388 aaPredicted RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 PLPP5Q8NEB5 264 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 GAL3ST3Q96A11 431 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 REPS1Q96D71 796 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 CRELD1Q96HD1 420 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 TSNARE1Q96NA8 513 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 PRDM9Q9NQV7 894 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 OPTCQ9UBM4 332 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 DHCR7Q9UBM7 475 aaKnown RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 PCSK5Q92824 1860 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 SOCS6O14544 535 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 NRP2O60462 931 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 CDH16O75309 829 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 RPS17P08708 135 aaKnown RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 KCNAB2Q13303 367 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 HIST2H2ACQ16777 129 aaPredicted RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 HKDC1Q2TB90 917 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 CATSPEREQ5SY80 951 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 HIST2H2AA3Q6FI13 130 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 TMIGD1Q6UXZ0 262 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 PPP1R32Q7Z5V6 425 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 CROCCP2Q86T23 111 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 ANKRD53Q8N9V6 530 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 SRFBP1Q8NEF9 429 aaKnown RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 ZNF483Q8TF39 744 aaPredicted RBP8.98□□□□□ -0.97
CLK4-209ENST00000521621 CCDC126Q96EE4 140 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 QRFPRQ96P65 431 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 ANKHQ9HCJ1 492 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 FER1L5A0AVI2 2057 aa8.98□□□□□ -0.97
CLK4-209ENST00000521621 CDC14CA4D256 554 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 FOXE1O00358 373 aaPredicted RBP8.97□□□□□ -0.97
CLK4-209ENST00000521621 E2F3O00716 465 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 SMIM24O75264 130 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 EPB42P16452 691 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 POLE2P56282 527 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 OCA2Q04671 838 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 SLC18A2Q05940 514 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 TUBB8Q3ZCM7 444 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 TCTN3Q6NUS6 607 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 RNF165Q6ZSG1 346 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 MRGPREQ86SM8 312 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 SLC22A9Q8IVM8 553 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 ZC3H7AQ8IWR0 971 aaKnown RBP8.97□□□□□ -0.97
CLK4-209ENST00000521621 UTP15Q8TED0 518 aaKnown RBP8.97□□□□□ -0.97
CLK4-209ENST00000521621 PYCR2Q96C36 320 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 L3HYPDHQ96EM0 354 aa8.97□□□□□ -0.97
CLK4-209ENST00000521621 ZNF490Q9ULM2 529 aaPredicted RBP8.97□□□□□ -0.97
CLK4-209ENST00000521621 MRPS18BQ9Y676 258 aaKnown RBP8.97□□□□□ -0.97
CLK4-209ENST00000521621 A0A088AWK7 358 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms