RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PILRBQ9UKJ0 227 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CHKBQ9Y259 395 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 TDRKHQ9Y2W6 561 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SYNJ1O43426 1573 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 FAM149AA5PLN7 773 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 GLTPD2A6NH11 291 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 C16orf97H3BN30 126 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 FPGTO14772 594 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 GLRA3O75311 464 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 KHDRBS3O75525 346 aaKnown RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 CDK2AP2O75956 126 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 PAK4O96013 591 aaPredicted RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC4A1P02730 911 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 CXCL10P02778 98 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 VTNP04004 478 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 RAF1P04049 648 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ERVK-10P10266 1014 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 SCP2P22307 547 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ALDH4A1P30038 563 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TIMP3P35625 211 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 CNN1P51911 297 aaKnown RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC34A1Q06495 639 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 GAMTQ14353 236 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 C20orf194Q5TEA3 1177 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF324BQ6AW86 544 aaPredicted RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TTC27Q6P3X3 843 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TRIM65Q6PJ69 517 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 LEKR1Q6ZMV7 388 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ADAMTSL2Q86TH1 951 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 KIRREL3Q8IZU9 778 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 PRSS35Q8N3Z0 413 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TEX9Q8N6V9 391 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 POC1AQ8NBT0 407 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR4C3Q8NH37 302 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC26A7Q8TE54 656 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 CHURC1Q8WUH1 139 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TSACCQ96A04 125 aaPredicted RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF560Q96MR9 790 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 PKP2Q99959 881 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 DDX50Q9BQ39 737 aaKnown RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 URM1Q9BTM9 101 aaKnown RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 NTMT1Q9BV86 223 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 KRTAP1-5Q9BYS1 174 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 XPO4Q9C0E2 1151 aaKnown RBP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMEM245Q9H330 911 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 EPS15L1Q9UBC2 864 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 DNPEPQ9ULA0 475 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 ODF2LQ9ULJ1 636 aa3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 WRNQ14191 1432 aaPredicted RBP eCLIP3.07□□□□□ -1.92
HMGN1P28-201ENST00000521340 TRBV2A0A0J9YWF9 115 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 INSIG1O15503 277 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 STBD1O95210 358 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 NR3C1P04150 777 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 ATP1B1P05026 303 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 YES1P07947 543 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 SBK2P0C263 348 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 LHCGRP22888 699 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 RBMS1P29558 406 aaKnown RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 NEDD4P46934 1319 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FMO5P49326 533 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 GPC3P51654 580 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 CSNK2BP67870 215 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 RPP38P78345 283 aaKnown RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 SP3Q02447 781 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 OPCMLQ14982 345 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 C9orf50Q5SZB4 431 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FUT10Q6P4F1 479 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 CTR9Q6PD62 1173 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC25A47Q6Q0C1 308 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 DHRS11Q6UWP2 260 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 DLEU7Q6UYE1 221 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZDHHC17Q8IUH5 632 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMEM126BQ8IUX1 230 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 DNAJC22Q8N4W6 341 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMEM99Q8N816 258 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR13A1Q8NGR1 328 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 EXOC6Q8TAG9 804 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 APOBEC4Q8WW27 367 aaKnown RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 GGHQ92820 318 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 NXPE2Q96DL1 559 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 EEF2KMTQ96G04 330 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF583Q96ND8 569 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 RUFY1Q96T51 708 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 MEIS3Q99687 375 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 RHNO1Q9BSD3 238 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 NUSAP1Q9BXS6 441 aaKnown RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 MTMR12Q9C0I1 747 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 C1orf21Q9H246 121 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 CUEDC2Q9H467 287 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FNDC4Q9H6D8 234 aaPredicted RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 LIN28AQ9H9Z2 209 aaKnown RBP3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 SYTL2Q9HCH5 934 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 SIX2Q9NPC8 291 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FLRT3Q9NZU0 649 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 DISP3Q9P2K9 1392 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 FBXL4Q9UKA2 621 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 EXOC6BQ9Y2D4 811 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMED7Q9Y3B3 224 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 RAD54L2Q9Y4B4 1467 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms