RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 HUS1BQ8NHY5 278 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 SLC5A11Q8WWX8 675 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 FIG4Q92562 907 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 NEIL2Q969S2 332 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 AURKBQ96GD4 344 aaPredicted RBP9.59□□□□□ -0.87
SPARC-202ENST00000520687 QRFPRQ96P65 431 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 PANX1Q96RD7 426 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 TEX101Q9BY14 249 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 ZDHHC5Q9C0B5 715 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 RAD21L1Q9H4I0 556 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 VCX3AQ9NNX9 186 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 PHPT1Q9NRX4 125 aaPredicted RBP9.59□□□□□ -0.87
SPARC-202ENST00000520687 USE1Q9NZ43 259 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 GULP1Q9UBP9 304 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 SCML1Q9UN30 329 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 PCDHB11Q9Y5F2 797 aa9.59□□□□□ -0.87
SPARC-202ENST00000520687 A0A087WXM4 84 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 MAGEB17A8MXT2 336 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 CLIC1O00299 241 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 RNASET2O00584 256 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 KDM1AO60341 852 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 DPM1O60762 260 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SCN2BO60939 215 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SEMA3DO95025 777 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PDGFBP01127 241 aaPredicted RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ERGP11308 486 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PCNAP12004 261 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRIM23P36406 574 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 RPS21P63220 83 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 YBX1P67809 324 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 CDK3Q00526 305 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 LSAMPQ13449 338 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 DAG1Q14118 895 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 UGT8Q16880 541 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TTC23Q5W5X9 447 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZNF776Q68DI1 518 aaPredicted RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 SDE2Q6IQ49 451 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 KIAA1161Q6NSJ0 714 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ABRAXAS1Q6UWZ7 409 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 C11orf96Q7Z7L8 435 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PATL1Q86TB9 770 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 HIPK1Q86Z02 1210 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 EPHX4Q8IUS5 362 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZNF547Q8IVP9 402 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZCCHC7Q8N3Z6 543 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRIML2Q8N7C3 387 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 GOT1L1Q8NHS2 421 aaPredicted RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 CLHC1Q8NHS4 586 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PNPT1Q8TCS8 783 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 SLC47A1Q96FL8 570 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PYURFQ96I23 114 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 MTERF1Q99551 399 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 SEPHS2Q99611 448 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 DUSP26Q9BV47 211 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRMT61BQ9BVS5 477 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 RAB11FIP5Q9BXF6 653 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 REXO4Q9GZR2 422 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRIT1Q9H3H1 467 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZNF282Q9UDV7 671 aaPredicted RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 VPS4AQ9UN37 437 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 COQ6Q9Y2Z9 468 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRIM64A6NGJ6 449 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 K7ESM1 405 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PCDH7O60245 1069 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TPST1O60507 370 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TBX19O60806 448 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 BMP10O95393 424 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ALBP02768 609 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TFAP2AP05549 437 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZNF23P17027 643 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 GSTM2P28161 218 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TTKP33981 857 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 MTHFRP42898 656 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 WNT3P56703 355 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZNF763Q0D2J5 394 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SLBPQ14493 270 aaKnown RBP eCLIP9.58□□□□□ -0.88
SPARC-202ENST00000520687 PON2Q15165 354 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TEAD4Q15561 434 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 CCSMST1Q4G0I0 132 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 ZC3H12BQ5HYM0 836 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 PRAMEF14Q5SWL7 426 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 PRAMEF13Q5VWM6 474 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 DOK6Q6PKX4 331 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TMPRSS11BQ86T26 416 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 HEATR4Q86WZ0 1026 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SLC30A8Q8IWU4 369 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 METTL4Q8N3J2 472 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 C1orf52Q8N6N3 182 aaKnown RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 OR5K1Q8NHB7 308 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 OR5K2Q8NHB8 316 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SMPDL3AQ92484 453 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 SNX19Q92543 992 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 TFGQ92734 400 aaPredicted RBP9.58□□□□□ -0.88
SPARC-202ENST00000520687 NCLNQ969V3 563 aa9.58□□□□□ -0.88
SPARC-202ENST00000520687 FAM131CQ96AQ9 280 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms