RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 DCAKDQ8WVC6 231 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
SREK1-207ENST00000520058 TM4SF19Q96DZ7 209 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 SEC16BQ96JE7 1060 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 BBC3Q96PG8 261 aaPredicted RBP17.51■□□□□ 0.39
SREK1-207ENST00000520058 CD244Q9BZW8 370 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 EHD1Q9H4M9 534 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 PPCSQ9HAB8 311 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 OPTCQ9UBM4 332 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 PTBP2Q9UKA9 531 aaKnown RBP17.51■□□□□ 0.39
SREK1-207ENST00000520058 MAP4K5Q9Y4K4 846 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 ANGPTL3Q9Y5C1 460 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 CACNA1GO43497 2377 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 LOC400499M0QZD8 3231 aa17.51■□□□□ 0.39
SREK1-207ENST00000520058 SCN2AQ99250 2005 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 COL6A6A6NMZ7 2263 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 A0A0A6YYC8 382 aaPredicted RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 ARGFXA6NJG6 315 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 TRIM49D1C9J1S8 452 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 I3L1I5 382 aaPredicted RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 PCDH17O14917 1159 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 LCMT2O60294 686 aaKnown RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 NSA2O95478 260 aaKnown RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 FAM153BP0C7A2 387 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 SCTRP47872 440 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 REEP5Q00765 189 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 DLG1Q12959 904 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 SLC29A2Q14542 456 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 FAM153CQ494X1 144 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ADGRD1Q6QNK2 874 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 PCSK4Q6UW60 755 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 TMIGD1Q6UXZ0 262 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 CENPLQ8N0S6 344 aaPredicted RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 C9orf43Q8TAL5 461 aaPredicted RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 STT3BQ8TCJ2 826 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 UBE2E3Q969T4 207 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ISL2Q96A47 359 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 PTCD3Q96EY7 689 aaKnown RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 SCYL1Q96KG9 808 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ATOH8Q96SQ7 321 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ING2Q9H160 280 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 SLC25A18Q9H1K4 315 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 SLC22A11Q9NSA0 550 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 TNPO3Q9Y5L0 923 aaKnown RBP17.5■□□□□ 0.39
SREK1-207ENST00000520058 SLC22A7Q9Y694 548 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 MED13Q9UHV7 2174 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 PIEZO2Q9H5I5 2752 aa17.5■□□□□ 0.39
SREK1-207ENST00000520058 ANKDD1BA6NHY2 528 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 UBXN8O00124 270 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 TAPBPO15533 448 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 P2RX6O15547 441 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 ZGLP1P0C6A0 271 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 EPB42P16452 691 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 MMP11P24347 488 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 PIK3CGP48736 1102 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 CSRP3P50461 194 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 ALDH18A1P54886 795 aaKnown RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 STXBP1P61764 594 aaKnown RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 IRF9Q00978 393 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 IRF8Q02556 426 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 RBBP7Q16576 425 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 XKR6Q5GH73 641 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 UBAP2Q5T6F2 1119 aaKnown RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 TMEM214Q6NUQ4 689 aaKnown RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 COX15Q7KZN9 410 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 LCA5Q86VQ0 697 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 EXD3Q8N9H8 876 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 CLEC1AQ8NC01 280 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 TMEM79Q9BSE2 394 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 CRB3Q9BUF7 120 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 SOX17Q9H6I2 414 aaPredicted RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 NT5DC2Q9H857 520 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 PSMC3IPQ9P2W1 217 aaPredicted RBP17.49■□□□□ 0.39
SREK1-207ENST00000520058 CTSFQ9UBX1 484 aa17.49■□□□□ 0.39
SREK1-207ENST00000520058 A0A088AWK7 358 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 VSTM2BA6NLU5 285 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 K7EPI3 171 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 AGPSO00116 658 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 MAP2K7O14733 419 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 SMIM24O75264 130 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 STATHP02808 62 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 ZNF10P21506 573 aaPredicted RBP17.48■□□□□ 0.39
SREK1-207ENST00000520058 IL10P22301 178 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 MAGEA12P43365 314 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 COL9A2Q14055 689 aaPredicted RBP17.48■□□□□ 0.39
SREK1-207ENST00000520058 PFKFB4Q16877 469 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 C18orf21Q32NC0 220 aaPredicted RBP17.48■□□□□ 0.39
SREK1-207ENST00000520058 IRAK1BP1Q5VVH5 260 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 METTL2BQ6P1Q9 378 aaKnown RBP17.48■□□□□ 0.39
SREK1-207ENST00000520058 SLCO4C1Q6ZQN7 724 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 MRGPREQ86SM8 312 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 GSPT2Q8IYD1 628 aaKnown RBP17.48■□□□□ 0.39
SREK1-207ENST00000520058 KCT2Q8NC54 265 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 OR9A4Q8NGU2 314 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 ZCCHC10Q8TBK6 192 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 NT5CQ8TCD5 201 aa17.48■□□□□ 0.39
SREK1-207ENST00000520058 UBTD2Q8WUN7 234 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms