RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 PHBP35232 272 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 MEF2AQ02078 507 aaPredicted RBP12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 ELOAQ14241 798 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 TLR1Q15399 786 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 MINDY4Q4G0A6 757 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 VN1R4Q7Z5H5 301 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 LAPTM4BQ86VI4 370 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 KRT78Q8N1N4 520 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 FAM26EQ8N5C1 309 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 OR9A4Q8NGU2 314 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 OR1F2PQ96R84 312 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 RBBP8Q99708 897 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 WDR83Q9BRX9 315 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 ZNF160Q9HCG1 818 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 GPRC5BQ9NZH0 403 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 SLC22A14Q9Y267 594 aa12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 SMG1Q96Q15 3661 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-203ENST00000518869 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 CCDC189A1A4V9 331 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 FAM159BA6NKW6 160 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 CDC7O00311 574 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 CLGNO14967 610 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 P2RX6O15547 441 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 CRABP2P29373 138 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 XCR1P46094 333 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 GLRBP48167 497 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 RAB10P61026 200 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 STXBP1P61764 594 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 ACTN3Q08043 901 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 MFAP5Q13361 173 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 PPP1R3AQ16821 1122 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 FHL5Q5TD97 284 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 B3GNTL1Q67FW5 361 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 SULT1C3Q6IMI6 304 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 IGFL2Q6UWQ7 119 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 Q6ZS92 163 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 GPSM1Q86YR5 675 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 STAG3L4Q8TBR4 150 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 NT5CQ8TCD5 201 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 NEIL2Q969S2 332 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 GPR22Q99680 433 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 GRHL1Q9NZI5 618 aa12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 COPG1Q9Y678 874 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-203ENST00000518869 TLN1Q9Y490 2541 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 IGHV1-45A0A0A0MS14 117 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 NPEPPSL1A6NEC2 478 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 PSMD12O00232 456 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 FANCGO15287 622 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 LCMT2O60294 686 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 KLHL18O94889 574 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 WDR47O94967 919 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 SERPINA6P08185 405 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 COX6A1P12074 109 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ALOX12P18054 663 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 IL1RNP18510 177 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 SCTRP47872 440 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 FOXL2P58012 376 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ARG2P78540 354 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TGM3Q08188 693 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TGFBIQ15582 683 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 EXT1Q16394 746 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 HIST2H2ACQ16777 129 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 PLEKHN1Q494U1 663 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 PAGE2BQ5JRK9 111 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 HIST2H2AA3Q6FI13 130 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TMEM205Q6UW68 189 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TMPRSS11BQ86T26 416 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 CEP97Q8IW35 865 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ZC3H7AQ8IWR0 971 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 PPM1NQ8N819 430 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 KCT2Q8NC54 265 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ARMC2Q8NEN0 867 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 SUN3Q8TAQ9 357 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 RHBDF1Q96CC6 855 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 FAR2Q96K12 515 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 C16orf45Q96MC5 204 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 TSNARE1Q96NA8 513 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 OR4K3Q96R72 315 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 CYTH2Q99418 400 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 MCMBPQ9BTE3 642 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ZNF700Q9H0M5 742 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 WWOXQ9NZC7 414 aa12.53□□□□□ -0.4
TMEM55A-203ENST00000518869 ABI3Q9P2A4 366 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms