RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GEMIN8Q9NWZ8 242 aaKnown RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 COPG2Q9UBF2 871 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 TNPO3Q9Y5L0 923 aaKnown RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 CDC14CA4D256 554 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 TK2O00142 265 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 PRPF4O43172 522 aaKnown RBP eCLIP20.91■□□□□ 0.945e-8■■■□□ 16
VEGFA-217ENST00000518538 NDUFS4O43181 175 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 FOXS1O43638 330 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 PRAMEF4O60810 478 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 CNOT3O75175 753 aaKnown RBP20.91■□□□□ 0.94
VEGFA-217ENST00000518538 CDH16O75309 829 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 IL10RAQ13651 578 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 RBBP5Q15291 538 aaKnown RBP20.91■□□□□ 0.94
VEGFA-217ENST00000518538 PCBP2Q15366 365 aaKnown RBP eCLIP20.91■□□□□ 0.941e-10■■□□□ 11.4
VEGFA-217ENST00000518538 ATP1A1-AS1Q5TC04 95 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 PRAMEF9Q5VWM5 478 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 METTL2BQ6P1Q9 378 aaKnown RBP20.91■□□□□ 0.94
VEGFA-217ENST00000518538 KRT78Q8N1N4 520 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 MREGQ8N565 214 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 KCT2Q8NC54 265 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 COL26A1Q96A83 441 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 PTCD3Q96EY7 689 aaKnown RBP20.91■□□□□ 0.94
VEGFA-217ENST00000518538 NT5DC2Q9H857 520 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 WDR54Q9H977 334 aa20.91■□□□□ 0.94
VEGFA-217ENST00000518538 MRPS2Q9Y399 296 aaKnown RBP20.91■□□□□ 0.94
VEGFA-217ENST00000518538 GOLGA8RI6L899 631 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 ERVH48-1M5A8F1 160 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 SMIM24O75264 130 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 FURINP09958 794 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 PYGBP11216 843 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 EPB42P16452 691 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 FBLP22087 321 aaKnown RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 GSTM2P28161 218 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 FOLR3P41439 243 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 IRF8Q02556 426 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 RGS1Q08116 209 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 PCDH1Q08174 1060 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 DSG2Q14126 1118 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 E2F2Q14209 437 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 TBCCQ15814 346 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 XKR6Q5GH73 641 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 FAM69BQ5VUD6 431 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 TMIGD1Q6UXZ0 262 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 PTGR2Q8N8N7 351 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 TRPV3Q8NET8 790 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 TTLQ8NG68 377 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 OR2Y1Q8NGV0 311 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 OR2W6PQ8NHA6 318 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 NT5CQ8TCD5 201 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 MMABQ96EY8 250 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 UBL7Q96S82 380 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 EFCAB11Q9BUY7 163 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 CTSFQ9UBX1 484 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 NXT1Q9UKK6 140 aaKnown RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 PTRH2Q9Y3E5 179 aaKnown RBP20.9■□□□□ 0.94
VEGFA-217ENST00000518538 SEC16AO15027 2179 aa20.9■□□□□ 0.94
VEGFA-217ENST00000518538 A0A0A6YYC8 382 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-217ENST00000518538 A0A1W2PPM1 405 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 STX16-NPEPL1H3BU86 382 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 I3L1I5 382 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-217ENST00000518538 STX16O14662 325 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 SERPIND1P05546 499 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 GSTA1P08263 222 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 KRT15P19012 456 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 CASP2P42575 452 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 AVPR1BP47901 424 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 SNRPNP63162 240 aaKnown RBP20.89■□□□□ 0.93
VEGFA-217ENST00000518538 CHIT1Q13231 466 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 LAPTM5Q13571 262 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 DOC2AQ14183 400 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 TBR1Q16650 682 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 PAGE2BQ5JRK9 111 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.89■□□□□ 0.931e-6■■■■■ 38.6
VEGFA-217ENST00000518538 CYP4X1Q8N118 509 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 RIBC1Q8N443 379 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-217ENST00000518538 TMEM151AQ8N4L1 468 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 TEX9Q8N6V9 391 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 ADAMTS17Q8TE56 1095 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 THAP4Q8WY91 577 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 MOCOSQ96EN8 888 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 SEC16BQ96JE7 1060 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 TMEM216Q9P0N5 145 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 ZNF282Q9UDV7 671 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-217ENST00000518538 POLHQ9Y253 713 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 ANGPTL3Q9Y5C1 460 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 SLC22A7Q9Y694 548 aa20.89■□□□□ 0.93
VEGFA-217ENST00000518538 LRRC14BA6NHZ5 514 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 H0YIG0 161 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 SIX3O95343 332 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-217ENST00000518538 NSA2O95478 260 aaKnown RBP20.88■□□□□ 0.93
VEGFA-217ENST00000518538 SBK3P0C264 359 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 CD22P20273 847 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 PIK3CGP48736 1102 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 IFFO1Q0D2I5 559 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 SSPNQ14714 243 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 NKG7Q16617 165 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 DEFB109BQ30KR1 87 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 BORAQ6PGQ7 559 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 AMER3Q8N944 861 aa20.88■□□□□ 0.93
VEGFA-217ENST00000518538 OR9A4Q8NGU2 314 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms