RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 SPATA13Q96N96 652 aa9.22□□□□□ -0.93
SH2D4A-202ENST00000518040 FOPNLQ96NB1 174 aa9.22□□□□□ -0.93
SH2D4A-202ENST00000518040 Q9UFV3 132 aa9.22□□□□□ -0.93
SH2D4A-202ENST00000518040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.22□□□□□ -0.93
SH2D4A-202ENST00000518040 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
SH2D4A-202ENST00000518040 A0A0U1RQJ8 604 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 A0A1W2PPV9 198 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 RNF212BA8MTL3 300 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 INAFM1C9JVW0 142 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 CES2O00748 559 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 KPNA5O15131 536 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 NRP2O60462 931 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 PDE9AO76083 593 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 C1orf105O95561 183 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 EPXP11678 715 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 PSMA3P25788 255 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 SLC1A1P43005 524 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 ST13P50502 369 aaKnown RBP9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 RIPPLY2Q5TAB7 128 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 DENND5AQ6IQ26 1287 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 CAVIN1Q6NZI2 390 aaKnown RBP9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 ZNF585AQ6P3V2 769 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 SASS6Q6UVJ0 657 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 VRK3Q8IV63 474 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 ARMC10Q8N2F6 343 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 OR52N2Q8NGI0 321 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 GORASP1Q9BQQ3 440 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 HSD3B7Q9H2F3 369 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 PLEKHF2Q9H8W4 249 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 TIMMDC1Q9NPL8 285 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 PNPLA3Q9NST1 481 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 ADAM21Q9UKJ8 722 aa9.21□□□□□ -0.93
SH2D4A-202ENST00000518040 HSPB2A8KAH6 182 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 MAGEB17A8MXT2 336 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 H7C1Q1 480 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ZNF189O75820 626 aaPredicted RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 GABRA1P14867 456 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 CD53P19397 219 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 FOXN2P32314 431 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 RPA3P35244 121 aaPredicted RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 RFC3P40938 356 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ASCL1P50553 236 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 MMP16P51512 607 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 OR4D2P58180 307 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ABRAXAS2Q15018 415 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 HSPB2Q16082 182 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 Q5PR19 223 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 KIF18BQ86Y91 864 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SLC13A5Q86YT5 568 aaPredicted RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 LIX1LQ8IVB5 337 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 CYP4Z2PQ8N1L4 340 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SMPDL3AQ92484 453 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 RNASE6Q93091 150 aaKnown RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 OR1F2PQ96R84 312 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SMC6Q96SB8 1091 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 EBNA1BP2Q99848 306 aaKnown RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 DEFB127Q9H1M4 99 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ZDHHC11Q9H8X9 412 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 MTRF1LQ9UGC7 380 aaKnown RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 TTC7AQ9ULT0 858 aaPredicted RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 FAM215AQ9Y5M1 114 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 TUBAL3A6NHL2 446 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ZNF839A8K0R7 811 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 DVL2O14641 736 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 KIF5CO60282 957 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 TUBB4AP04350 444 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 BMP7P18075 431 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 AOAHP28039 575 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PSMB4P28070 264 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 RBL1P28749 1068 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 HSD17B2P37059 387 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 BCL6P41182 706 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PPIAP62937 165 aaKnown RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ABATP80404 500 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PRDX1Q06830 199 aaKnown RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ARHGAP19Q14CB8 494 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 STX1AQ16623 288 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ANKRD20A2Q5SQ80 823 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 NDUFAF5Q5TEU4 345 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ANKRD20A1Q5TYW2 823 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ANKRD20A3Q5VUR7 823 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 KAZNQ674X7 775 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 KCTD11Q693B1 232 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ZNF425Q6IV72 752 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SLC22A16Q86VW1 577 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 TMEM156Q8N614 296 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ARMC2Q8NEN0 867 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SKA2Q8WVK7 121 aaPredicted RBP9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 TMEM158Q8WZ71 300 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 SARAFQ96BY9 339 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 IQCDQ96DY2 449 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PANX3Q96QZ0 392 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PANX2Q96RD6 677 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PIP5K1AQ99755 562 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 ACAT2Q9BWD1 397 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 PCYOX1Q9UHG3 505 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 DUSP10Q9Y6W6 482 aa9.2□□□□□ -0.94
SH2D4A-202ENST00000518040 A0A1B0GVC2 190 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms