RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 IGHV3-23P01764 117 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 DLATP10515 647 aaKnown RBP-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 CD1DP15813 335 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 GOLGA8FQ08AF8 430 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 PDE7AQ13946 482 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TAF7LQ5H9L4 462 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 C6orf141Q5SZD1 244 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 GRTP1Q5TC63 336 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TMCO4Q5TGY1 634 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 Q6ZR03 302 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZSCAN30Q86W11 494 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TBC1D10CQ8IV04 446 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 ANKRD42Q8N9B4 389 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TRIML1Q8N9V2 468 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 STARD8Q92502 1023 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TMEM159Q96B96 161 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 KTI12Q96EK9 354 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TMEM47Q9BQJ4 181 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 HEMGNQ9BXL5 484 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 DNAI2Q9GZS0 605 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 LHX5Q9H2C1 402 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 PIGMQ9H3S5 423 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 CUEDC2Q9H467 287 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 POLR1BQ9H9Y6 1135 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TBC1D17Q9HA65 648 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 WDR41Q9HAD4 459 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 SLC28A3Q9HAS3 691 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 SOHLH2Q9NX45 425 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 PEMTQ9UBM1 199 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 ERVW-1Q9UQF0 538 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 SPEF1Q9Y4P9 236 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 CPQQ9Y646 472 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 NUP214P35658 2090 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 ENO4A6NNW6 628 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 BET1O15155 118 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 MMP23AO75900 390 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 ICAM1P05362 532 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 KRT13P13646 458 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF250P15622 560 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 RCC1P18754 421 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 CDH3P22223 829 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 POU1F1P28069 291 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 TFPI2P48307 235 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 GZMMP51124 257 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 PDX1P52945 283 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 ACVR1Q04771 509 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 KIAA0753Q2KHM9 967 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 SLC35G1Q2M3R5 365 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 DEFB116Q30KQ4 102 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 C6orf136Q5SQH8 315 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 SYT13Q7L8C5 426 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 TADA2BQ86TJ2 420 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF429Q86V71 674 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 CEP97Q8IW35 865 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 CDK20Q8IZL9 346 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 DEFB119Q8N690 84 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 CYB561D1Q8N8Q1 229 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR11H4Q8NGC9 324 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR1B1Q8NGR6 318 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 SCAMP5Q8TAC9 235 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 VN1R17PQ8TDU5 208 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 IRGQQ8WZA9 623 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 APOL5Q9BWW9 433 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR51J1Q9H342 316 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM207AQ9NSI2 230 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 RBAKQ9NYW8 714 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 NDUFAF4Q9P032 175 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 APOBEC3BQ9UH17 382 aaKnown RBP-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 DAPK2Q9UIK4 370 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 CLIC4Q9Y696 253 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 SELENOKQ9Y6D0 94 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 SCN2AQ99250 2005 aa-1.5□□□□□ -2.65
RNU6-539P-201ENST00000516665 IGLV8-61A0A075B6I0 122 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 TRBV5-4A0A0C4DH59 114 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM90A7PA6NKC0 464 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM90A22PA8MWA6 464 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM90A12PA8MX19 464 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 KPNA5O15131 536 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 MTRF1O75570 445 aaKnown RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 RPLP0P05388 317 aaKnown RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 NPY1RP25929 384 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 ELAVL4P26378 380 aaKnown RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 SLC15A1P46059 708 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR3A4PP47883 348 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 PNLIPRP1P54315 467 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 UBASH3AP57075 661 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 PRKG2Q13237 762 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 ASAH1Q13510 395 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 FASTKQ14296 549 aaKnown RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 HLTFQ14527 1009 aaKnown RBP eCLIP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 MVPQ14764 893 aaKnown RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 SHROOM1Q2M3G4 852 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 ARL13BQ3SXY8 428 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 SBK1Q52WX2 424 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF805Q5CZA5 627 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 GCNT6Q5T4J0 391 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 ADALQ6DHV7 355 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 CCDC149Q6ZUS6 474 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 RAB11FIP2Q7L804 512 aa-1.51□□□□□ -2.65
RNU6-539P-201ENST00000516665 TPH2Q8IWU9 490 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms