RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TBC1D17Q9HA65 648 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 DDX21Q9NR30 783 aaKnown RBP eCLIP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SOHLH2Q9NX45 425 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 RBAKQ9NYW8 714 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SF3B1O75533 1304 aaKnown RBP eCLIP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 KCPQ6ZWJ8 1503 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 IGLV8-61A0A075B6I0 122 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TRBV4-1A0A0J9YWV2 114 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ELOVL7A1L3X0 281 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 FSD2A1L4K1 749 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 E7EVH7 732 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZBTB43O43298 467 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 HCRTO43612 131 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 BAIAP3O94812 1187 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 LETM1O95202 739 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 IGLV2-8P01709 118 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 IGHV3-23P01764 117 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 DLATP10515 647 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF250P15622 560 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 HSPA6P17066 643 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 RPL17P18621 184 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 PEX2P28328 305 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TFPI2P48307 235 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 AMPD3Q01432 767 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 PNRC1Q12796 327 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TAF10Q12962 218 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 PPP2R5BQ15173 497 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 RNPS1Q15287 305 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 RPS6KA2Q15349 733 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ARMCX4Q5H9R4 360 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TXNDC8Q6A555 127 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 MCM10Q7L590 875 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF429Q86V71 674 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TBC1D10CQ8IV04 446 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CEP97Q8IW35 865 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CCDC13Q8IYE1 715 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 OSR2Q8N2R0 312 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 TSPYL6Q8N831 410 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CYB561D1Q8N8Q1 229 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ANKRD42Q8N9B4 389 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR1B1Q8NGR6 318 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR6X1Q8NH79 312 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 IPO4Q8TEX9 1081 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 IRGQQ8WZA9 623 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 STARD8Q92502 1023 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 PEX13Q92968 403 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CITED2Q99967 270 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CUEDC2Q9H467 287 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 EPHX3Q9H6B9 360 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ELAC1Q9H777 363 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 DEPPQ9NTK1 212 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 COPG2Q9UBF2 871 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 APOBEC3BQ9UH17 382 aaKnown RBP-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 HAO1Q9UJM8 370 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CORO2BQ9UQ03 480 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ERVW-1Q9UQF0 538 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 ANKRD6Q9Y2G4 727 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 CPQQ9Y646 472 aa-1.27□□□□□ -2.61
RNU6-542P-201ENST00000516405 DOCK8Q8NF50 2099 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 TRBV5-4A0A0C4DH59 114 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM149AA5PLN7 773 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 POM121BA6NF01 834 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 ENO4A6NNW6 628 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 RNF103O00237 685 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 ASNA1O43681 348 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 MMP23AO75900 390 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 CD1DP15813 335 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 NPY1RP25929 384 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 SLC7A2P52569 658 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 UBASH3AP57075 661 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 IL15RAQ13261 267 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 ASAH1Q13510 395 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 HIST2H2ACQ16777 129 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 SHROOM1Q2M3G4 852 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF528Q3MIS6 628 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 C6orf136Q5SQH8 315 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 C6orf141Q5SZD1 244 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM120AOSQ5T036 256 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 GRTP1Q5TC63 336 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 SPATA8Q6RVD6 105 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 Q6ZRN7 208 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 SHISA6Q6ZSJ9 500 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 NOL8Q76FK4 1167 aaKnown RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 FCRLAQ7L513 359 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 JAZF1Q86VZ6 243 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 TMEM99Q8N816 258 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 TRIML1Q8N9V2 468 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM156AQ8NDB6 213 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR11H4Q8NGC9 324 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 CFAP61Q8NHU2 1237 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 SCAMP5Q8TAC9 235 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 VN1R17PQ8TDU5 208 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 JDP2Q8WYK2 163 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 PROX1Q92786 737 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 AIFM3Q96NN9 605 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 PRPF18Q99633 342 aaKnown RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 HSPB9Q9BQS6 159 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 URM1Q9BTM9 101 aaKnown RBP-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 HEMGNQ9BXL5 484 aa-1.28□□□□□ -2.61
RNU6-542P-201ENST00000516405 EIF2AQ9BY44 585 aaKnown RBP-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms