RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 APOL4Q9BPW4 351 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 REEP1Q9H902 201 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 PLGRKTQ9HBL7 147 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 DMRT3Q9NQL9 472 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 CCDC177Q9NQR7 707 aaPredicted RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 PIPSLA2A3N6 862 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 LINC01553A4QN01 128 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 C1QTNF3-AMACRE9PGA6 284 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SUV39H1O43463 412 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 JRKO75564 520 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 POP7O75817 140 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 PAPLNO95428 1278 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ETHE1O95571 254 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 DDX5P17844 614 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 PRKACGP22612 351 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 PIGAP37287 484 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 PDE7AQ13946 482 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 RGNQ15493 299 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 MEP1AQ16819 746 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 TCEAL5Q5H9L2 206 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ZNF697Q5TEC3 545 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 KDM4DQ6B0I6 523 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 EP400NLQ6ZTU2 488 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 IKBIPQ70UQ0 350 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 TRMT11Q7Z4G4 463 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 C12orf40Q86WS4 652 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ZNF366Q8N895 744 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 OR4A15Q8NGL6 344 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.3□□□□□ -0.12
NUP54-217ENST00000514987 LZICQ8WZA0 190 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 THAP11Q96EK4 314 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 HSH2DQ96JZ2 352 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 LRRC3BQ96PB8 259 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 EPYCQ99645 322 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 LIN28AQ9H9Z2 209 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 MYNNQ9NPC7 610 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SH3BP4Q9P0V3 963 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 GULP1Q9UBP9 304 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 WBP11Q9Y2W2 641 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 TPRKBQ9Y3C4 175 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 NAALAD2Q9Y3Q0 740 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 U3KQV3 271 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SLC1A7O00341 560 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 RPN2P04844 631 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 ITIH1P19827 911 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 CCNA2P20248 432 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 KELP23276 732 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 PTX3P26022 381 aaPredicted RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 ACADLP28330 430 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 HSD17B2P37059 387 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 TAP2Q03519 686 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 FCHO2Q0JRZ9 810 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 STARD3Q14849 445 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 PDGFRLQ15198 375 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 XAF1Q6GPH4 301 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 LCTLQ6UWM7 567 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 ERN2Q76MJ5 926 aaKnown RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 COMMD6Q7Z4G1 85 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 ZC3H7AQ8IWR0 971 aaKnown RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 SLC30A8Q8IWU4 369 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 KRT78Q8N1N4 520 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 METTL4Q8N3J2 472 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 NATD1Q8N6N6 113 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 CXorf40AQ8TE69 158 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 BADQ92934 168 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 NXPE3Q969Y0 559 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 NODALQ96S42 347 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 BCL7BQ9BQE9 202 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 HDAC8Q9BY41 377 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 GPN2Q9H9Y4 310 aaPredicted RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 OBP2AQ9NY56 170 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 AHSPQ9NZD4 102 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 FAF1Q9UNN5 650 aaPredicted RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 ABCG2Q9UNQ0 655 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 BTBD3Q9Y2F9 522 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 SAMHD1Q9Y3Z3 626 aaKnown RBP14.29□□□□□ -0.12
NUP54-217ENST00000514987 PCDHGB1Q9Y5G3 927 aa14.29□□□□□ -0.12
NUP54-217ENST00000514987 KLHL33A6NCF5 533 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 MYO1GB0I1T2 1018 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 YY2O15391 372 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 GPR37L1O60883 481 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 ATE1O95260 518 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 C9P02748 559 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 IL7RP16871 459 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 JUNDP17535 347 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 SERPINB1P30740 379 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 POLR2IP36954 125 aaKnown RBP14.28□□□□□ -0.12
NUP54-217ENST00000514987 CSNK2BP67870 215 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 FADDQ13158 208 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 CDK5R2Q13319 367 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 ARHGAP19Q14CB8 494 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 CYP2A13Q16696 494 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 CTU2Q2VPK5 515 aaKnown RBP14.28□□□□□ -0.12
NUP54-217ENST00000514987 ANKRD26P1Q6NSI1 321 aa14.28□□□□□ -0.12
NUP54-217ENST00000514987 TRIM40Q6P9F5 258 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms