RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MCATQ8IVS2 390 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 LRRC34Q8IZ02 419 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 GALNT15Q8N3T1 639 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 AFAP1L2Q8N4X5 818 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF781Q8N8C0 355 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 CDYL2Q8N8U2 506 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 PIWIL2Q8TC59 973 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 NT5CQ8TCD5 201 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF473Q8WTR7 871 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 METTL2AQ96IZ6 378 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 FCRL4Q96PJ5 515 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 B3GNT4Q9C0J1 378 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ELOVL6Q9H5J4 265 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF395Q9H8N7 513 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 FBXO8Q9NRD0 319 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 SOHLH2Q9NX45 425 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 VTI1BQ9UEU0 232 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 DNAJC15Q9Y5T4 150 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 KNTC1P50748 2209 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 CEP295Q9C0D2 2601 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ANKDD1BA6NHY2 528 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 TCP11X1B4DZS4 312 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 H0YGG7 62 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ZSCAN9O15535 394 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 OR1F1O43749 312 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CSO75390 466 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 TBX6O95947 436 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CHEK2O96017 543 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ALOX15P16050 662 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 PRPH2P23942 346 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CSTF2P33240 577 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■■□□□ 13.9
PDLIM5-220ENST00000514830 ARL1P40616 181 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 GCGRP47871 477 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ARL4DP49703 201 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ARF3P61204 181 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 MC2RQ01718 297 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CUL3Q13618 768 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 PRTGQ2VWP7 1150 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 SNAP47Q5SQN1 464 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 YOD1Q5VVQ6 348 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 VN1R5Q7Z5H4 357 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CRLF3Q8IUI8 442 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ARHGEF39Q8N4T4 335 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF655Q8N720 491 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CAMKVQ8NCB2 501 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 HUS1BQ8NHY5 278 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 RERGQ96A58 199 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF501Q96CX3 271 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CMTM7Q96FZ5 175 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 CMKLR1Q99788 373 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 SLC6A16Q9GZN6 736 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 KLHL25Q9H0H3 589 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 SYNPO2LQ9H987 977 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 FANCEQ9HB96 536 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 SLCO1B3Q9NPD5 702 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 DMRT3Q9NQL9 472 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 FGF21Q9NSA1 209 aa11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 AKAP7Q9P0M2 348 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-220ENST00000514830 BAHCC1Q9P281 2608 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 CCDC187A0A096LP49 1063 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 FEZF1A0PJY2 475 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 A8MU76 341 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 HDAC3O15379 428 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 HCRTR1O43613 425 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SHOX2O60902 331 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 CRCPO75575 148 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SEMA3DO95025 777 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 PDYNP01213 254 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SLC35G6P0C7Q6 338 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SPTBP11277 2137 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 FGF5P12034 268 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 FOLR1P15328 257 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 PTX3P26022 381 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 LSP1P33241 339 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TSFMP43897 325 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SEPHS1P49903 392 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 RAB15P59190 212 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 HYAL2Q12891 473 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 RBBP5Q15291 538 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TMEM35AQ53FP2 167 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 XKR7Q5GH72 579 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 GARNL3Q5VVW2 1013 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 CLEC6AQ6EIG7 209 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 FRMPD2BQ6IN97 320 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TLDC1Q6P9B6 456 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 IGF2-ASQ6U949 168 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 UNQ6494/PRO21346Q6UXR6 183 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 ASPGQ86U10 573 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 MYLK4Q86YV6 388 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms