RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SH2D4BQ5SQS7 431 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 FCRL6Q6DN72 434 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 RGS9BPQ6ZS82 235 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 RPS27LQ71UM5 84 aaKnown RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 SYVN1Q86TM6 617 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 FAM129CQ86XR2 697 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 SLITRK4Q8IW52 837 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 GPR135Q8IZ08 494 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 DNAJC22Q8N4W6 341 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 CDYL2Q8N8U2 506 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 MFSD9Q8NBP5 474 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 OR52B6Q8NGF0 335 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 AGAP11Q8TF27 550 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 SLC13A3Q8WWT9 602 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 MOCOSQ96EN8 888 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 SLC6A20Q9NP91 592 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ACSS2Q9NR19 701 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 CUEDC1Q9NWM3 386 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 FAM53CQ9NYF3 392 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 PSD3Q9NYI0 1048 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 AHSPQ9NZD4 102 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 TMEM9Q9P0T7 183 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 VTI1BQ9UEU0 232 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ZFP69BQ9UJL9 534 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 KLHL20Q9Y2M5 609 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 A0A0J9YVX5 310 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FEZF1A0PJY2 475 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FOXE1O00358 373 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 PPP6CO00743 305 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 HAT1O14929 419 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 ZSCAN9O15535 394 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SNNO75324 88 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 CSO75390 466 aaKnown RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 CLEC3AO75596 197 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 OR4F21O95013 312 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 EIF2S1P05198 315 aaKnown RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 CAPN1P07384 714 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 VIMP08670 466 aaKnown RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SLC35G6P0C7Q6 338 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SCTRP47872 440 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 STXBP1P61764 594 aaKnown RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 REEP5Q00765 189 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 GUCY1A3Q02108 690 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FOXM1Q08050 763 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 TRAF3Q13114 568 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 PWP1Q13610 501 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 E2F2Q14209 437 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 NDUFA9Q16795 377 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FAM214AQ32MH5 1076 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SGO1Q5FBB7 561 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 HES3Q5TGS1 186 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 TMEM164Q5U3C3 297 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FRG2Q64ET8 278 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 LETMD1Q6P1Q0 360 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 TLDC1Q6P9B6 456 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 ASPGQ86U10 573 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 LAS2Q8IYD9 372 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 GBP7Q8N8V2 638 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 DCBLD1Q8N8Z6 715 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 TTC29Q8NA56 475 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 RCBTB1Q8NDN9 531 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SRFBP1Q8NEF9 429 aaKnown RBP9.71□□□□□ -0.86
NEDD9-214ENST00000513989 OR7G3Q8NG95 312 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SELENOMQ8WWX9 145 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 CMTM7Q96FZ5 175 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 PPM1MQ96MI6 270 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 FRG2BQ96QU4 278 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SHCBP1LQ9BZQ2 653 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SLC7A5P2Q9GIP4 190 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 RHBGQ9H310 441 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 RARRES3Q9UL19 164 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 SH2B3Q9UQQ2 575 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 TSC22D4Q9Y3Q8 395 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 AP1M2Q9Y6Q5 423 aa9.71□□□□□ -0.86
NEDD9-214ENST00000513989 ARHGEF17Q96PE2 2063 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 AHCTF1Q8WYP5 2266 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 A0A088AWK7 358 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 CCDC187A0A096LP49 1063 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TRPC5OSA6NMA1 111 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 EFCAB7A8K855 629 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TCP11X1B4DZS4 312 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 B4E171 279 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TMEM150CB9EJG8 249 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 H0YGG7 62 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 SLC28A1O00337 649 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 MANBAO00462 879 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 UBFD1O14562 309 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 FFAR3O14843 346 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 POLR1CO15160 346 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 GPR42O15529 346 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ITM2AO43736 263 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 LCMT2O60294 686 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 CHRNGP07510 517 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 SERPINA6P08185 405 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 HBQ1P09105 142 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 JMJD7P0C870 316 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 HSD3B1P14060 373 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF10P21506 573 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms