RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PCDHGA11Q9Y5H2 935 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 GLYATL1P3A0A0U1RQE8 302 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 MEIOCA2RUB1 952 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 SNAPC5O75971 98 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 SNAI1O95863 264 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 JUNBP17275 347 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 IL32P24001 234 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 NTSP30990 170 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 DCTP40126 519 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 OMPP47874 163 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 TAS2R41P59536 307 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 CLDN10P78369 228 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 OR4F3Q6IEY1 312 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 METTL4Q8N3J2 472 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 TMIEQ8NEW7 156 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 OR5H6Q8NGV6 325 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 HMCESQ96FZ2 354 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 RUVBL1Q9Y265 456 aaKnown RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ARL5AQ9Y689 179 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 KNL1Q8NG31 2342 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 A0A1W2PQ67 120 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ICMTO60725 284 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 GPX3P22352 226 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 KELP23276 732 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 CCND3P30281 292 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 CLCN4P51793 760 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PPP3R1P63098 170 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ATAD3CQ5T2N8 411 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 Q8N402 240 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 USP7Q93009 1102 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF599Q96NL3 588 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 NSUN5Q96P11 429 aaKnown RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 DPCDQ9BVM2 203 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 TNKS2Q9H2K2 1166 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 FOLH1BQ9HBA9 442 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 EMC3Q9P0I2 261 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 FZD4Q9ULV1 537 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 UBR2Q8IWV8 1755 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PAPSS2O95340 614 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 VIPP01282 170 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 MANFP55145 182 aaKnown RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 GANABQ14697 944 aaKnown RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 RFTN2Q52LD8 501 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 GPAT3Q53EU6 434 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 IRAK1BP1Q5VVH5 260 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ZFAND4Q86XD8 727 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ASB15Q8WXK1 588 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 CDKN2AIPNLQ96HQ2 116 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ZBTB20Q9HC78 741 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 RIMKLBQ9ULI2 386 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 SLC27A6Q9Y2P4 619 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 B8ZZF3 427 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 MITFO75030 526 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ADAM23O75077 832 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 NIPSNAP2O75323 286 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PRNPP04156 253 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 HLA-DPB1P04440 258 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PSMA3P25788 255 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 RYKP34925 604 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 TARDBPQ13148 414 aaKnown RBP eCLIP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 DUOXA1Q1HG43 343 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ZDHHC20Q5W0Z9 365 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 ARFGAP1Q8N6T3 406 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PSMG2Q969U7 264 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 NPY6RQ99463 290 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PIGUQ9H490 435 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 PHPT1Q9NRX4 125 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 DUS2Q9NX74 493 aaKnown RBP10.91□□□□□ -0.66
TCOF1-211ENST00000513346 FLRT1Q9NZU1 646 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 FKBPLQ9UIM3 349 aa10.91□□□□□ -0.66
TCOF1-211ENST00000513346 SULT1C4O75897 302 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 DNASE1P24855 282 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TM4SF4P48230 202 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 CXCR3P49682 368 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SH3BP2P78314 561 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 MTAPQ13126 283 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 CHIT1Q13231 466 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 UGT8Q16880 541 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 MSANTD2Q6P1R3 559 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 BEND5Q7L4P6 421 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 RAVER1Q8IY67 606 aaKnown RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SPERTQ8NA61 448 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 FAM46DQ8NEK8 389 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 RHEBL1Q8TAI7 183 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 NEURL2Q9BR09 285 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 FAIM2Q9BWQ8 316 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 POPDC3Q9HBV1 291 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 FKBP14Q9NWM8 211 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 AKAP8O43823 692 aaKnown RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SHMT2P34897 504 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TSPAN5P62079 268 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 IL10RBQ08334 325 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 C2orf80Q0P641 193 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 AAK1Q2M2I8 961 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms