RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NME2P1O60361 137 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ZWINTO95229 277 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 METTL18O95568 372 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ERGP11308 486 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 NME2P22392 152 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 CASQ1P31415 396 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 DEKP35659 375 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 BDKRB1P46663 353 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 MAT1AQ00266 395 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ACVR1Q04771 509 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 MAPKAPK3Q16644 382 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 CCDC38Q502W7 563 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 FASTKD1Q53R41 847 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 AARS2Q5JTZ9 985 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 RNFT1Q5M7Z0 435 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ZNF425Q6IV72 752 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ANKRD37Q7Z713 158 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 MARVELD2Q8N4S9 558 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 NRGNQ92686 78 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 RND1Q92730 232 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ACAT2Q9BWD1 397 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 KRTAP3-3Q9BYR6 98 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 KRTAP3-2Q9BYR7 98 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 SYNPO2LQ9H987 977 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 CCM2LQ9NUG4 571 aaPredicted RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 RNF6Q9Y252 685 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 IGKV1-8A0A0C4DH67 115 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 NKX2-6A6NCS4 301 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 MAN1A2O60476 641 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 SLC25A12O75746 678 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 NSA2O95478 260 aaKnown RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 GAS8O95995 478 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 TAS2R50P59544 299 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 SNX1Q13596 522 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 ZNF534Q76KX8 674 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 CD163Q86VB7 1156 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 CLYBLQ8N0X4 340 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 CPSF7Q8N684 471 aaKnown RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 OR6P1Q8NGX9 317 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 SKA2Q8WVK7 121 aaPredicted RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 SMPDL3AQ92484 453 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 PEX13Q92968 403 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 TRIM45Q9H8W5 580 aaPredicted RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
SPCS3-204ENST00000513139 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
SPCS3-204ENST00000513139 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 FAM90A27PA6NNH2 459 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 CCNDBP1O95273 360 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 MATN4O95460 622 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 TPOP07202 933 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 PTGER1P34995 402 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 TTPAP49638 278 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 PRAMEP78395 509 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 CDH17Q12864 832 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 FOXD4Q12950 439 aaPredicted RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 MYBPHQ13203 477 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 SEMA3AQ14563 771 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 KCTD19Q17RG1 926 aaPredicted RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 ICE2Q659A1 982 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 OR9A1PQ8NGU1 263 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 OR9A4Q8NGU2 314 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 SLC35B2Q8TB61 432 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 CAPZA3Q96KX2 299 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 LPAR4Q99677 370 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 GSX1Q9H4S2 264 aaPredicted RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 DNAJB12Q9NXW2 375 aaKnown RBP13.08□□□□□ -0.32
SPCS3-204ENST00000513139 SLC2A6Q9UGQ3 507 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 SAR1BQ9Y6B6 198 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 MPDZO75970 2070 aa13.08□□□□□ -0.32
SPCS3-204ENST00000513139 RTTNQ86VV8 2226 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ERI2A8K979 691 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 P2RX6O15547 441 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 LIASO43766 372 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 KLK8O60259 260 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ADRA1DP25100 572 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 HSD17B2P37059 387 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms