RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 PRR32B1ATL7 298 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CLDN4O14493 209 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CTAGE5O15320 804 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 SYNCRIPO60506 623 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 HSPA4LO95757 839 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ACHEP22303 614 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 MARK3P27448 753 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 MNDAP41218 407 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 NR2C2P49116 596 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ASCL1P50553 236 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CAPZA1P52907 286 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 ARHGAP1Q07960 439 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 DMP1Q13316 513 aaPredicted RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 HSDL1Q3SXM5 330 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ZNF718Q3SXZ3 478 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CELF3Q5SZQ8 465 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 CORO6Q6QEF8 472 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 RUFY3Q7L099 469 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ANKRD33Q7Z3H0 272 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 DSG4Q86SJ6 1040 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 PHLDB2Q86SQ0 1253 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ADIPOR2Q86V24 386 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 NR2C2APQ86WQ0 139 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CRYBG2Q8N1P7 616 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 RFLNBQ8N5W9 214 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CPSF7Q8N684 471 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 XXYLT1Q8NBI6 393 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 LRRC8CQ8TDW0 803 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 SSMEM1Q8WWF3 244 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ATP6V0A1Q93050 837 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 ATP6V1E2Q96A05 226 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 HES6Q96HZ4 224 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 LMLNQ96KR4 655 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 INPP4AQ96PE3 977 aaPredicted RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 OLFM1Q99784 485 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 RHNO1Q9BSD3 238 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 SPZ1Q9BXG8 430 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 UPF3BQ9BZI7 483 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 TFB2MQ9H5Q4 396 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 AZI2Q9H6S1 392 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 GRPEL1Q9HAV7 217 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 XAB2Q9HCS7 855 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 KLHL1Q9NR64 748 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 INTS10Q9NVR2 710 aaKnown RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 DONSONQ9NYP3 566 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 PROCRQ9UNN8 238 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 LOC285556D6RIA3 1793 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 GRIN2DO15399 1336 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 UMODL1Q5DID0 1318 aa3.93□□□□□ -1.78
HTT-210ENST00000512909 CDK5RAP2Q96SN8 1893 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RSPH10B2B2RC85 870 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 GAPDHSO14556 408 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 LMX1BO60663 402 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 ATP9AO75110 1047 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 STAM2O75886 525 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 PPP1R3DO95685 299 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 PENKP01210 267 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 INHBAP08476 426 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RAB40ALP0C0E4 278 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RSPH10BP0C881 870 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 ACP2P11117 423 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 SCG2P13521 617 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 GNA11P29992 359 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 TCF7P36402 384 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 CCR10P46092 362 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 ZNF41P51814 821 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 PPP5CP53041 499 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 MAPK12P53778 367 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 LRIT3Q3SXY7 679 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 TCTE1Q5JU00 501 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 CCNYL2Q5T2Q4 361 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 SFMBT2Q5VUG0 894 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 SLC27A1Q6PCB7 646 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 PSRC1Q6PGN9 363 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 PPP1R21Q6ZMI0 780 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RBM23Q86U06 439 aaKnown RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 PLA2G4DQ86XP0 818 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 SLC24A4Q8NFF2 622 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 OR1J1Q8NGS3 322 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 CCDC12Q8WUD4 166 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 SEPT1Q8WYJ6 367 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 TM9SF4Q92544 642 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 ARSGQ96EG1 525 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RMDN2Q96LZ7 410 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 UHRF2Q96PU4 802 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 CITED2Q99967 270 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 PSD2Q9BQI7 771 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RTP3Q9BQQ7 232 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 BTBD10Q9BSF8 475 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 FAM49AQ9H0Q0 323 aaPredicted RBP3.92□□□□□ -1.78
HTT-210ENST00000512909 GLT8D2Q9H1C3 349 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 ACKR4Q9NPB9 350 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 OSER1Q9NX31 292 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 SPHK1Q9NYA1 384 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 COQ3Q9NZJ6 369 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 VPS54Q9P1Q0 977 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms