RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 GPR143P51810 404 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC7A2P52569 658 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PSMC5P62195 406 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAE1P78406 368 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALDH6A1Q02252 535 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF211Q13398 564 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCOA4Q13772 614 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PAFAH1B3Q15102 231 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TOMM20Q15388 145 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP51A1Q16850 503 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LINC01559Q495D7 138 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOWAHCQ53LP3 525 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFHC1Q5JVL4 640 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDKL4Q5MAI5 379 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRIF1Q5T3J3 769 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MROH9Q5TGP6 573 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATF7IP2Q5U623 682 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CPZQ66K79 652 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATG9BQ674R7 924 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL31Q6EBC2 164 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GLB1LQ6UWU2 654 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ISCA2Q86U28 154 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SFR1Q86XK3 245 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRROSQ86YC3 692 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPALPP1Q8IXQ4 340 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ETFBKMTQ8IXQ9 262 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 C4orf19Q8IY42 314 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ULK2Q8IYT8 1036 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF808Q8N4W9 903 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 AVL9Q8NBF6 648 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LPCAT1Q8NF37 534 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR7D4Q8NG98 312 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR52K1Q8NGK4 314 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R35Q8TAP8 253 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HM13Q8TCT9 377 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC2A14Q8TDB8 520 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYTL5Q8TDW5 730 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 JADE3Q92613 823 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB39BQ96DA2 213 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEB18Q96M61 343 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 C12orf66Q96MD2 445 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF578Q96N58 590 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RMDN3Q96TC7 470 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NUDT9Q9BW91 350 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPL1Q9BYD6 325 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RBCK1Q9BYM8 510 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 POLR3FQ9H1D9 316 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NSUN3Q9H649 340 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR55Q9H6Y2 383 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAB39LQ9H9S4 337 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFCAB1Q9HAE3 211 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDE7BQ9NP56 450 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HPS4Q9NQG7 708 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 STARD7Q9NQZ5 370 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 DDX18Q9NVP1 670 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SH3BP4Q9P0V3 963 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CPA4Q9UI42 421 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MSRAQ9UJ68 235 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAPRE3Q9UPY8 281 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GNT3Q9Y2A9 372 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MED13Q9UHV7 2174 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TEX13CA0A0J9YWL9 993 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PNMA8CA0A1B0GUJ8 204 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2orf72A6NCS6 295 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OTOL1A6NHN0 477 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 B8ZZF3 427 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDC7O00311 574 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PEX12O00623 359 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC9A3R1O14745 358 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB5O15062 677 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OGTO15294 1046 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF208O43345 1280 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM3O75382 744 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCAF4O95104 1147 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT75O95678 551 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OXSR1O95747 527 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANXA5P08758 320 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR52Z1P0C646 297 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM49P0CI25 452 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM49CP0CI26 452 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ESRRAP11474 423 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTSEP14091 401 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CPB1P15086 417 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPS2P15880 293 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP2A7P20853 494 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAOAP21397 527 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GCSHP23434 173 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 IGFALSP35858 605 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOX3P41225 446 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEA4P43358 317 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GSSP48637 474 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNASE1L1P49184 302 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PSEN2P49810 448 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 FCGRTP55899 365 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB8AP61006 207 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPS7P62081 194 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 FKBP3Q00688 224 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRG1Q02297 640 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLCQ05315 142 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms