RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 OR51F1A6NGY5 319 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 A6NNC1 897 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 KPNA5O15131 536 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 PSTPIP1O43586 416 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 SPOPO43791 374 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 ATE1O95260 518 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 LY6G6DO95868 133 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 TPP2P29144 1249 aaPredicted RBP10.85□□□□□ -0.67
RNF4-216ENST00000511859 XCR1P46094 333 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 USP10Q14694 798 aaKnown RBP10.85□□□□□ -0.67
RNF4-216ENST00000511859 TMED2Q15363 201 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 NSDHLQ15738 373 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 CCSMST1Q4G0I0 132 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 SFT2D3Q587I9 215 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 SHEQ5VZ18 495 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 ZFP62Q8NB50 900 aaPredicted RBP10.85□□□□□ -0.67
RNF4-216ENST00000511859 TTYH2Q9BSA4 534 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 ACAT2Q9BWD1 397 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 C10orf88Q9H8K7 445 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
RNF4-216ENST00000511859 CRIM1Q9NZV1 1036 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 REXO2Q9Y3B8 237 aaKnown RBP10.85□□□□□ -0.67
RNF4-216ENST00000511859 PCDHA13Q9Y5I0 950 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 ARHGAP21Q5T5U3 1957 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 IGKV1-8A0A0C4DH67 115 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 OR14I1A6ND48 311 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 OR2W5A6NFC9 320 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 IQCF5A8MTL0 148 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 SYT5O00445 386 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 FCHO1O14526 889 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 PEX1O43933 1283 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 PDE9AO76083 593 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 IPO7O95373 1038 aaKnown RBP10.84□□□□□ -0.67
RNF4-216ENST00000511859 COMTP21964 271 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 IL10P22301 178 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 ACVR2AP27037 513 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 ITGA8P53708 1063 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 MLF1P58340 268 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 SLC26A5P58743 744 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 MPP1Q00013 466 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 PRDX1Q06830 199 aaKnown RBP10.84□□□□□ -0.67
RNF4-216ENST00000511859 DAZAP2Q15038 168 aaPredicted RBP10.84□□□□□ -0.67
RNF4-216ENST00000511859 KCTD11Q693B1 232 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 ZNF425Q6IV72 752 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 B3GNT6Q6ZMB0 384 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 BBS12Q6ZW61 710 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 CHSY3Q70JA7 882 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 KIAA1328Q86T90 577 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 OR52N2Q8NGI0 321 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 OR9A4Q8NGU2 314 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 FAM222BQ8WU58 562 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
RNF4-216ENST00000511859 SMPDL3AQ92484 453 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 PWWP2AQ96N64 755 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 SPATA13Q96N96 652 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 PANX3Q96QZ0 392 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 SYNPO2LQ9H987 977 aa10.84□□□□□ -0.67
RNF4-216ENST00000511859 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 MAGEB17A8MXT2 336 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 FAM47E-STBD1D6RA91 191 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 NPIPA2E9PIF3 369 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 NPIPA3F8WFD2 350 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 BCKDKO14874 412 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 NRDCO43847 1150 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 ZNF189O75820 626 aaPredicted RBP10.83□□□□□ -0.68
RNF4-216ENST00000511859 CCNDBP1O95273 360 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 GLI4P10075 376 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 RPA3P35244 121 aaPredicted RBP10.83□□□□□ -0.68
RNF4-216ENST00000511859 RFC3P40938 356 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 BCL6P41182 706 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 BDKRB1P46663 353 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 OR4D2P58180 307 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 ARHGAP19Q14CB8 494 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 ABRAXAS2Q15018 415 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 FLYWCH1Q4VC44 716 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 CCDC181Q5TID7 509 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 CCDC50Q8IVM0 306 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 CDKL3Q8IVW4 592 aaPredicted RBP10.83□□□□□ -0.68
RNF4-216ENST00000511859 KATNAL2Q8IYT4 538 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 OR9A1PQ8NGU1 263 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 OR4L1Q8NH43 312 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 LKAAEAR1Q8TD35 194 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 CREB3L4Q8TEY5 395 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 EBNA1BP2Q99848 306 aaKnown RBP10.83□□□□□ -0.68
RNF4-216ENST00000511859 DEFB127Q9H1M4 99 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 LRRC40Q9H9A6 602 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 Q9UFV3 132 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 HYOU1Q9Y4L1 999 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 NFS1Q9Y697 457 aa10.83□□□□□ -0.68
RNF4-216ENST00000511859 PRMT5O14744 637 aaPredicted RBP10.82□□□□□ -0.68
RNF4-216ENST00000511859 P2RX6O15547 441 aa10.82□□□□□ -0.68
RNF4-216ENST00000511859 PSMD3O43242 534 aa10.82□□□□□ -0.68
RNF4-216ENST00000511859 ARHGEF9O43307 516 aa10.82□□□□□ -0.68
RNF4-216ENST00000511859 GOT2P00505 430 aaKnown RBP10.82□□□□□ -0.68
RNF4-216ENST00000511859 RBP3P10745 1247 aa10.82□□□□□ -0.68
RNF4-216ENST00000511859 ERGP11308 486 aa10.82□□□□□ -0.68
RNF4-216ENST00000511859 PCSK6P29122 969 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms