RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 C7orf57Q8NEG2 295 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 OR2T3Q8NH03 318 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 OSR1Q8TAX0 266 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-205ENST00000511129 KAT2AQ92830 837 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 ARRDC3Q96B67 414 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 TRMT61AQ96FX7 289 aaKnown RBP4.83□□□□□ -1.64
SCARB2-205ENST00000511129 HES6Q96HZ4 224 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 WDFY2Q96P53 400 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 LRRC3BQ96PB8 259 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 INPP4AQ96PE3 977 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-205ENST00000511129 C19orf43Q9BQ61 176 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 ACBD6Q9BR61 282 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 SLC26A1Q9H2B4 701 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 VCX2Q9H322 139 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 SFXN1Q9H9B4 322 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 PCDH9Q9HC56 1237 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 PIH1D3Q9NQM4 214 aaKnown RBP4.83□□□□□ -1.64
SCARB2-205ENST00000511129 GMEB2Q9UKD1 530 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 NENFQ9UMX5 172 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 B3GNT3Q9Y2A9 372 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 CASP8AP2Q9UKL3 1982 aa4.83□□□□□ -1.64
SCARB2-205ENST00000511129 TNRC18O15417 2968 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-205ENST00000511129 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 C13orf42A0A1B0GVH6 325 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ERICH2A1L162 156 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 AGAP5A6NIR3 686 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 HIP1O00291 1037 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PRYO14603 147 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 DSCR3O14972 297 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SYN3O14994 580 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 CHADO15335 359 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF264O43296 627 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SPRY1O43609 319 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ECE2O60344 883 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 MED24O75448 989 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 TGM6O95932 706 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 APOA1P02647 267 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PEPDP12955 493 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 FUT1P19526 365 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ACHEP22303 614 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PON1P27169 355 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 TIA1P31483 386 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 TRIM23P36406 574 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 RFX5P48382 616 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ALDH7A1P49419 539 aaKnown RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GMPSP49915 693 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ENTPD1P49961 510 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GTF2A1P52655 376 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PROK1P58294 105 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 VBP1P61758 197 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 RPL23AP62750 156 aaKnown RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 B4GALNT1Q00973 533 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 NCBP1Q09161 790 aaKnown RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SPP2Q13103 211 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PPIL2Q13356 520 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GAB1Q13480 694 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 STIM1Q13586 685 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 UGP2Q16851 508 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF829Q3KNS6 432 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 EFHC1Q5JVL4 640 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PIP5KL1Q5T9C9 394 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PTRHD1Q6GMV3 140 aaKnown RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 WBP2NLQ6ICG8 309 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 DLK2Q6UY11 383 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GLDNQ6ZMI3 551 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF782Q6ZMW2 699 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 COLCA1Q6ZS62 124 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 FJX1Q86VR8 437 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 FAM228AQ86W67 206 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 NUDT13Q86X67 352 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GPR137CQ8N3F9 429 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 L3MBTL4Q8NA19 623 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF397Q8NF99 534 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 OR56B1Q8NGI3 324 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 OR10S1Q8NGN2 331 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 OR10T2Q8NGX3 314 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 OCC1Q8TAD7 63 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 RLN3Q8WXF3 142 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PIGKQ92643 395 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 KIFAP3Q92845 792 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF560Q96MR9 790 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SPATA13Q96N96 652 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GPR78Q96P69 363 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 GAD1Q99259 594 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 CYTH2Q99418 400 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ZNF577Q9BSK1 485 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 C9orf16Q9BUW7 83 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 FRMD8P1Q9BZ68 369 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 SEMA4CQ9C0C4 833 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 S1PR5Q9H228 398 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 UBQLN3Q9H347 655 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 BICC1Q9H694 974 aaKnown RBP4.82□□□□□ -1.64
SCARB2-205ENST00000511129 ANKZF1Q9H8Y5 726 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 PALMDQ9NP74 551 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 TREM1Q9NP99 234 aa4.82□□□□□ -1.64
SCARB2-205ENST00000511129 NCKIPSDQ9NZQ3 722 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms