RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 AGAP7PQ5VUJ5 663 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 FRA10AC1Q70Z53 315 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 NKAPQ8N5F7 415 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 CAMKVQ8NCB2 501 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 ATL1Q8WXF7 558 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 NEIL2Q969S2 332 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 SNRNP40Q96DI7 357 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 AGAP4Q96P64 663 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 SPNS1Q9H2V7 528 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 ANKHQ9HCJ1 492 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 NSMCE4AQ9NXX6 385 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 TXNDC16Q9P2K2 825 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 UTP11Q9Y3A2 253 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 UTP20O75691 2785 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 PTPN13Q12923 2485 aa14.02□□□□□ -0.16
UBE2D3-228ENST00000508974 KCNE1BA0A087WTH5 132 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 IGHV3-20A0A0C4DH32 117 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 TCP11X1B4DZS4 312 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 KLHL18O94889 574 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NSA2O95478 260 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 B3GALT4O96024 378 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 SLC35G6P0C7Q6 338 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 XCR1P46094 333 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 MRPL49Q13405 166 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 CSHL1Q14406 222 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 TMEM214Q6NUQ4 689 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 IGFL3Q6UXB1 125 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 LANCL3Q6ZV70 420 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NDUFAF7Q7L592 441 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 TMPRSS11BQ86T26 416 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 CUZD1Q86UP6 607 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 THOC6Q86W42 341 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 PDSS2Q86YH6 399 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 CTAGE3PQ8IX95 158 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 KBTBD2Q8IY47 623 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 SIRT6Q8N6T7 355 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 MFSD9Q8NBP5 474 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 GALNT11Q8NCW6 608 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 OR51Q1Q8NH59 317 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 SLC5A11Q8WWX8 675 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 TM4SF19Q96DZ7 209 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 THAP11Q96EK4 314 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 PDLIM5Q96HC4 596 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 WDR77Q9BQA1 342 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 ASF1BQ9NVP2 202 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 PTGFRNQ9P2B2 879 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 SLC22A14Q9Y267 594 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 NAALAD2Q9Y3Q0 740 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 DYRK1BQ9Y463 629 aa14.02□□□□□ -0.17
UBE2D3-228ENST00000508974 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 IGHV1-45A0A0A0MS14 117 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 TCRBV9S1A1TA0A576 114 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 CTAGE15A4D2H0 777 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 CDC123O75794 336 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 BMP10O95393 424 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 F10P00742 488 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 C8orf89P0DMQ9 161 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 HNF4AP41235 474 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 GPX6P59796 221 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 OLR1P78380 273 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 SLC7A5Q01650 507 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 FBXO48Q5FWF7 155 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 CTAGE6Q86UF2 777 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 FAM26EQ8N5C1 309 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 OR5T3Q8NGG3 340 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 DNAJB14Q8TBM8 379 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 FBXO25Q8TCJ0 367 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 BRIX1Q8TDN6 353 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 CDKL2Q92772 493 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 PEX11GQ96HA9 241 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 C16orf45Q96MC5 204 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 TGIF2Q9GZN2 237 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 VN1R1Q9GZP7 353 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 EPS8L2Q9H6S3 715 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 NOVA2Q9UNW9 492 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 OARD1Q9Y530 152 aa14.01□□□□□ -0.17
UBE2D3-228ENST00000508974 LRRK2Q5S007 2527 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 TRBC2A0A5B9 178 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 ESYT3A0FGR9 886 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 H0YIG0 161 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 EIF3HO15372 352 aaKnown RBP eCLIP14□□□□□ -0.17
UBE2D3-228ENST00000508974 FAM155BO75949 473 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 SEC24DO94855 1032 aaPredicted RBP14□□□□□ -0.17
UBE2D3-228ENST00000508974 WDR47O94967 919 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 PRR35P0CG20 571 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 ZNF888P0CJ79 500 aaPredicted RBP14□□□□□ -0.17
UBE2D3-228ENST00000508974 VARSP26640 1264 aaKnown RBP14□□□□□ -0.17
UBE2D3-228ENST00000508974 GMPRP36959 345 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 GDF5P43026 501 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 USP10Q14694 798 aaKnown RBP14□□□□□ -0.17
UBE2D3-228ENST00000508974 PCOLCEQ15113 449 aa14□□□□□ -0.17
UBE2D3-228ENST00000508974 RBBP5Q15291 538 aaKnown RBP14□□□□□ -0.17
UBE2D3-228ENST00000508974 NR6A1Q15406 480 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms