RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 MFSD9Q8NBP5 474 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 M1APQ8TC57 530 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 NR4A3Q92570 626 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 NDNQ99608 321 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 VN1R1Q9GZP7 353 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 NSMCE4AQ9NXX6 385 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 STMN3Q9NZ72 180 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
CCHCR1-227ENST00000508852 A1L4Q6 167 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 E2F3O00716 465 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 LRRTM2O43300 516 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 PRAMEF2O60811 474 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 NPPBP16860 134 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 AHRP35869 848 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 ARL4CP56559 192 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 TAS2R50P59544 299 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 TEDDM1Q5T9Z0 273 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 HIBCHQ6NVY1 386 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 NKAPQ8N5F7 415 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 PLPP5Q8NEB5 264 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 CATSPER1Q8NEC5 780 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 OR4K1Q8NGD4 311 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 SNF8Q96H20 258 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 RNF14Q9UBS8 474 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 ADAMTS6Q9UKP5 1117 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 OSGIN2Q9Y236 505 aa12.85□□□□□ -0.35
CCHCR1-227ENST00000508852 SVILO95425 2214 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 TRBC2A0A5B9 178 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SYNDIG1LA6NDD5 238 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 MAGEB17A8MXT2 336 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 CCDC188H7C350 402 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 WDPCPO95876 746 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 ITGAMP11215 1152 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 CDH1P12830 882 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 HNMTP50135 292 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 CDKN2DP55273 166 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 ZNF33BQ06732 778 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 CSHL1Q14406 222 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 MEP1AQ16819 746 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SYT16Q17RD7 645 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 BTBD16Q32M84 506 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 HECTD2Q5U5R9 776 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 H3F3CQ6NXT2 135 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 LGI4Q8N135 537 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 BBOF1Q8ND07 529 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 TRPV3Q8NET8 790 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 RELTQ969Z4 430 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 ALKBH8Q96BT7 664 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 VPS39Q96JC1 886 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 LPAR4Q99677 370 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SYNPO2LQ9H987 977 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 MMP25Q9NPA2 562 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 SUCOQ9UBS9 1254 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 DYRK1BQ9Y463 629 aa12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 DIDO1Q9BTC0 2240 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-227ENST00000508852 CENPEQ02224 2701 aa12.83□□□□□ -0.35
CCHCR1-227ENST00000508852 SCN3AQ9NY46 2000 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 FEZF1A0PJY2 475 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 SGK494L7N484 410 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 FFAR3O14843 346 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 GPR42O15529 346 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 NDUFS4O43181 175 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 OR1F1O43749 312 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 CLDN1O95832 211 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ALOX12P18054 663 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 IL1RNP18510 177 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 GSTM2P28161 218 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 GABRB3P28472 473 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ELK3P41970 407 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 PAFAH1B1P43034 410 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 CASP6P55212 293 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 CDKL1Q00532 357 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 TIAL1Q01085 375 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 DR1Q01658 176 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ZRSR2Q15696 482 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 NSDHLQ15738 373 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 RBM20Q5T481 1227 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 GFRALQ6UXV0 394 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ANKRD37Q7Z713 158 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms