RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 UBXN2AP68543 259 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 PAX8Q06710 450 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 PHKG1Q16816 387 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 FRRS1Q6ZNA5 592 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 SLC37A3Q8NCC5 494 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 TSPAN14Q8NG11 270 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 ARSGQ96EG1 525 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 LPAR4Q99677 370 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 MTMR12Q9C0I1 747 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 NDE1Q9NXR1 346 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 CHORDC1Q9UHD1 332 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 DDX25Q9UHL0 483 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 RNF150Q9ULK6 438 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 R4GN57 208 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 CICQ96RK0 1608 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 ZNF318Q5VUA4 2279 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 PPLO60437 1756 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 SZT2Q5T011 3432 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 H0YAE9 185 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 TRIM77I1YAP6 450 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 TEX28O15482 410 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 GFPT2O94808 682 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 CD27P26842 260 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 TSFMP43897 325 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 IL11RAQ14626 422 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 OR4K1Q8NGD4 311 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 FAM71F1Q96KD3 344 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 RAB11FIP5Q9BXF6 653 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 GPR88Q9GZN0 384 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 CCDC68Q9H2F9 335 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 PANK3Q9H999 370 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 IL17BQ9UHF5 180 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 RPS6KL1Q9Y6S9 549 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 WNK3Q9BYP7 1800 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 YTHDC2Q9H6S0 1430 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 NHSQ6T4R5 1651 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 QRICH2Q9H0J4 1663 aa4.29□□□□□ -1.72
TOPBP1-206ENST00000508524 A0A087WUV0 522 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 A0A1W2PPK0 400 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 PTGESO14684 152 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 AHCYL1O43865 530 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 KRT33AO76009 404 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 IRF2P14316 349 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 PGFP49763 221 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 LIG4P49917 911 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 VAMP7P51809 220 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 VEZF1Q14119 521 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 CES4AQ5XG92 561 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 IL17RELQ6ZVW7 336 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 SMIM5Q71RC9 77 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 KLHDC1Q8N7A1 406 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 C17orf47Q8NEP4 570 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 RASL10AQ92737 203 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 AGAP4Q96P64 663 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 PANK2Q9BZ23 570 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 KLHL4Q9C0H6 718 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 NOL11Q9H8H0 719 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 SLC24A2Q9UI40 661 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 QSER1Q2KHR3 1735 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 CRB1P82279 1406 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 ANKARQ7Z5J8 1434 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 BTAF1O14981 1849 aa4.28□□□□□ -1.72
TOPBP1-206ENST00000508524 CPDO75976 1380 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 MKI67P46013 3256 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 IGSF1Q8N6C5 1336 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 KCPQ6ZWJ8 1503 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 SH3BP5O60239 455 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 IGHV3-13P01766 116 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 ABCB1P08183 1280 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 LHX1P48742 406 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 CUL3Q13618 768 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 CDH18Q13634 790 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 GPR33Q49SQ1 333 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 C6orf163Q5TEZ5 329 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 GARNL3Q5VVW2 1013 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 CAMKMTQ7Z624 323 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 NDUFAF2Q8N183 169 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 OR2L2Q8NH16 312 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 TEKT4Q8WW24 435 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 CCDC106Q9BWC9 280 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 ZMYND12Q9H0C1 365 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 ANAPC2Q9UJX6 822 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 AKAP12Q02952 1782 aa4.27□□□□□ -1.73
TOPBP1-206ENST00000508524 COL6A3P12111 3177 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 MYH14Q7Z406 1995 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 LOC105371242A0A075B767 164 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 ERAL1O75616 437 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 CEACAM4O75871 244 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 SOX3P41225 446 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms