RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ATP6V1B1P15313 513 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 RPL35AP18077 110 aaKnown RBP3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 OR3A3P47888 321 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 DCDC1P59894 354 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 ARHGAP1Q07960 439 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 ITGA9Q13797 1035 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 KRTAP24-1Q3LI83 254 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 LRRC38Q5VT99 294 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 ZNF770Q6IQ21 691 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 KLHL10Q6JEL2 608 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 LEKR1Q6ZMV7 388 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 BTN2A1Q7KYR7 527 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 KCTD9Q7L273 389 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 HOGA1Q86XE5 327 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 CCDC83Q8IWF9 413 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 AQP12AQ8IXF9 295 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 DCLK2Q8N568 766 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 ZNF713Q8N859 430 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 CDKN2AIPNLQ96HQ2 116 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 GMPPAQ96IJ6 420 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 PI4K2AQ9BTU6 479 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 CACNG6Q9BXT2 260 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 GPR173Q9NS66 373 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 EXOC1Q9NV70 894 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 PANK4Q9NVE7 773 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 RNF186Q9NXI6 227 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 TMOD3Q9NYL9 352 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 FBXL4Q9UKA2 621 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 GAB2Q9UQC2 676 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 NSG2Q9Y328 171 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 PCDHGA1Q9Y5H4 931 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 COLEC10Q9Y6Z7 277 aa3.57□□□□□ -1.84
HMGB1P28-201ENST00000507778 PFASO15067 1338 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 NPHP3Q7Z494 1330 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 MTMR11A4FU01 709 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ANTXRLA6NF34 631 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ZNF195O14628 629 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 PGRMC2O15173 223 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 TTI1O43156 1089 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SCO2O43819 266 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ACSL4O60488 711 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 GLCEO94923 617 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 CFC1BP0CG36 223 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 CFC1P0CG37 223 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 UROSP10746 265 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 KRT3P12035 628 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 GOT1P17174 413 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 RBMS1P29558 406 aaKnown RBP3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 CTNNB1P35222 781 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 LEPRP48357 1165 aaKnown RBP3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 KHKP50053 298 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SNRPD1P62314 119 aaKnown RBP3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 TMEM132DQ14C87 1099 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SGSM1Q2NKQ1 1148 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ARMCX4Q5H9R4 360 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 PM20D1Q6GTS8 502 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 OR4C11Q6IEV9 310 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ARHGAP11AQ6P4F7 1023 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 TMEM270Q6UE05 265 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 BHLHA9Q7RTU4 235 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 COX8CQ7Z4L0 72 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 KLHDC8AQ8IYD2 350 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 TCEANCQ8N8B7 351 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SMAP2Q8WU79 429 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 GATAD1Q8WUU5 269 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ZNRF4Q8WWF5 429 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 AZIN2Q96A70 460 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 NXPE2Q96DL1 559 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SLC5A7Q9GZV3 580 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 CUEDC2Q9H467 287 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ZNF696Q9H7X3 374 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 HACD3Q9P035 362 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 TRPC4Q9UBN4 977 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 PILRBQ9UKJ0 227 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 NCKAP1Q9Y2A7 1128 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 SELENOKQ9Y6D0 94 aa3.56□□□□□ -1.84
HMGB1P28-201ENST00000507778 DOCK7Q96N67 2140 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 CNTNAP2Q9UHC6 1331 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 A0A1W2PRV1 198 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 MEIOCA2RUB1 952 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 A8MVM7 634 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 LINC01565O15544 149 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 GRID2O43424 1007 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 KIF5CO60282 957 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 CYTIPO60759 359 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 RTN2O75298 545 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 VCLP18206 1134 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 AADACP22760 399 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 SERPINB6P35237 376 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 OR3A2P47893 321 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 PAX9P55771 341 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 NME5P56597 212 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 OR1D5P58170 312 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 CSNK2BP67870 215 aa3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 RPP38P78345 283 aaKnown RBP3.55□□□□□ -1.84
HMGB1P28-201ENST00000507778 C17orf67Q0P5P2 114 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms