RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CRYABP02511 175 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 GABRB3P28472 473 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 FNTAP49354 379 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 AGTR2P50052 363 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 CDKN2DP55273 166 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PMP22Q01453 160 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 DHX9Q08211 1270 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PPP1R7Q15435 360 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PHKG1Q16816 387 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 RNASEH2BQ5TBB1 312 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 LCTLQ6UWM7 567 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC26A11Q86WA9 606 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PALM2Q8IXS6 379 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 BEST3Q8N1M1 668 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 MFSD9Q8NBP5 474 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC13A3Q8WWT9 602 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SGPP1Q9BX95 441 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 KCNK13Q9HB14 408 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PARVBQ9HBI1 364 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 TAS2R13Q9NYV9 303 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC17A6Q9P2U8 582 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 COPG2Q9UBF2 871 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SEC14L3Q9UDX4 400 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 ENTPD4Q9Y227 616 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 GOLGA6L10A0A0M3HER8 536 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 HNRNPRO43390 633 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 NRDCO43847 1150 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 CDC123O75794 336 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 HIST1H2AGP0C0S8 130 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC35G6P0C7Q6 338 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 MYBL2P10244 700 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 NPPBP16860 134 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 HIST1H2ADP20671 130 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 CCND1P24385 295 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 GRK3P35626 688 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ST13P50502 369 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 MEF2AQ02078 507 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 SPANXN3Q5MJ09 141 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 CAPN13Q6MZZ7 669 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 PAPD4Q6PIY7 484 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 TMEM207Q6UWW9 146 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 SRRM1Q8IYB3 904 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 OR5T3Q8NGG3 340 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 DNAJB8Q8NHS0 232 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 GABPB2Q8TAK5 448 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ITLN2Q8WWU7 325 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 PYCR2Q96C36 320 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 PEX11GQ96HA9 241 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 HIST1H2AHQ96KK5 128 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF354BQ96LW1 612 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 OSBPL9Q96SU4 736 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 HIST1H2AJQ99878 128 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 H2AFJQ9BTM1 129 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 SUCOQ9UBS9 1254 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ASIC3Q9UHC3 531 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 SH3BGRL2Q9UJC5 107 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
HMGCS1-204ENST00000507293 PABPN1LA6NDY0 278 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CCL21O00585 134 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 MAN1A2O60476 641 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TTC4O95801 387 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TSPAN12O95859 305 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 PRF1P14222 555 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 PGGT1BP53609 377 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 RHAGQ02094 409 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TUBA3CQ13748 450 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ABRAXAS2Q15018 415 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 EXT1Q16394 746 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ZXDCQ2QGD7 858 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 SFT2D3Q587I9 215 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ACER2Q5QJU3 275 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 SP5Q6BEB4 398 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TUBA3EQ6PEY2 450 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 PCGF5Q86SE9 256 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CRLF3Q8IUI8 442 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CNTN4Q8IWV2 1026 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC35F6Q8N357 371 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 GPATCH11Q8N954 259 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 OR56A3Q8NH54 315 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 M1APQ8TC57 530 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ACTRT1Q8TDG2 376 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 TSLPQ969D9 159 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 MOCOSQ96EN8 888 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CERS2Q96G23 380 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CCDC120Q96HB5 630 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 SIGLEC12Q96PQ1 595 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 OR4K3Q96R72 315 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 OR1F2PQ96R84 312 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 NPAS2Q99743 824 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 HAUS8Q9BT25 410 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms