RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 POLE2P56282 527 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 SKP1P63208 163 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 DSG2Q14126 1118 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 SOWAHCQ53LP3 525 aaPredicted RBP18.38■□□□□ 0.53
LMNA-221ENST00000506981 TECRLQ5HYJ1 363 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 FAM69BQ5VUD6 431 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 ATG9BQ674R7 924 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 DTWD1Q8N5C7 304 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 TRPV3Q8NET8 790 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 TTLQ8NG68 377 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 UBTD2Q8WUN7 234 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 TM4SF19Q96DZ7 209 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 ADNPQ9H2P0 1102 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 PPCSQ9HAB8 311 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 ANKHQ9HCJ1 492 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 PRM3Q9NNZ6 103 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 CTSFQ9UBX1 484 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 TMCO1Q9UM00 188 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 KCNMB2Q9Y691 235 aa18.38■□□□□ 0.53
LMNA-221ENST00000506981 URADA6NGE7 173 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 PEX12O00623 359 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 FAM87AP0C7U9 286 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 VARSP26640 1264 aaKnown RBP18.37■□□□□ 0.53
LMNA-221ENST00000506981 GCAP28676 217 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 VSNL1P62760 191 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 PWP1Q13610 501 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 LY6DQ14210 128 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 SLBPQ14493 270 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMNA-221ENST00000506981 NKG7Q16617 165 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 PFKFB4Q16877 469 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 XKR6Q5GH73 641 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 SLCO4C1Q6ZQN7 724 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 PLD6Q8N2A8 252 aaKnown RBP18.37■□□□□ 0.53
LMNA-221ENST00000506981 ZNF740Q8NDX6 193 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 ADAMTS17Q8TE56 1095 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 MIEF2Q96C03 454 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 BBC3Q96PG8 261 aaPredicted RBP18.37■□□□□ 0.53
LMNA-221ENST00000506981 MACROD1Q9BQ69 325 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 SPNS1Q9H2V7 528 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 EPB41L4BQ9H329 900 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 EHD1Q9H4M9 534 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 SOX17Q9H6I2 414 aaPredicted RBP18.37■□□□□ 0.53
LMNA-221ENST00000506981 TRPC4Q9UBN4 977 aa18.37■□□□□ 0.53
LMNA-221ENST00000506981 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMNA-221ENST00000506981 V9GYY5 206 aaPredicted RBP18.37■□□□□ 0.53
LMNA-221ENST00000506981 ARGFXA6NJG6 315 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 H0YIG0 161 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 K7EPI3 171 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 MAP2K7O14733 419 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 CNOT3O75175 753 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 SMIM24O75264 130 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 NSA2O95478 260 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 IGHEP01854 428 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 IL1RNP18510 177 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 GSTM2P28161 218 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 AGTR2P50052 363 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 ALDH18A1P54886 795 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 RRADP55042 308 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 IRF8Q02556 426 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 LAPTM5Q13571 262 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 SETDB1Q15047 1291 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 PAGE2BQ5JRK9 111 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 TMEM214Q6NUQ4 689 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 PCSK4Q6UW60 755 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 TMIGD1Q6UXZ0 262 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 TIFABQ6ZNK6 161 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 KCT2Q8NC54 265 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 STT3BQ8TCJ2 826 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 PTCD3Q96EY7 689 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 VPS50Q96JG6 964 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 GPR78Q96P69 363 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 EFCAB11Q9BUY7 163 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 PITHD1Q9GZP4 211 aaPredicted RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 MKKSQ9NPJ1 570 aaPredicted RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 ACSS2Q9NR19 701 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 C14orf105Q9NVL8 296 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 GEMIN8Q9NWZ8 242 aaKnown RBP18.36■□□□□ 0.53
LMNA-221ENST00000506981 XPR1Q9UBH6 696 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 TBK1Q9UHD2 729 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 MAP4K5Q9Y4K4 846 aa18.36■□□□□ 0.53
LMNA-221ENST00000506981 LOC400499M0QZD8 3231 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 ANKDD1BA6NHY2 528 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 FOXS1O43638 330 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 RFPL1O75677 317 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 MTHFD2P13995 350 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 EPB42P16452 691 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 CHIT1Q13231 466 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 KCNAB2Q13303 367 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 HERC3Q15034 1050 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 HIST2H2ACQ16777 129 aaPredicted RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 HIST2H2AA3Q6FI13 130 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 NIPAL1Q6NVV3 410 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 SHISA6Q6ZSJ9 500 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 ABHD13Q7L211 337 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 MRGPREQ86SM8 312 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 APLFQ8IW19 511 aaPredicted RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 PRSS58Q8IYP2 241 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 ARHGEF39Q8N4T4 335 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 OR9A4Q8NGU2 314 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 NT5CQ8TCD5 201 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms