RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 C10orf90Q96M02 699 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 CATSPER2Q96P56 530 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 XPR1Q9UBH6 696 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 ZFP69BQ9UJL9 534 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 MRPS18BQ9Y676 258 aaKnown RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 TLN1Q9Y490 2541 aaKnown RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 SMIM24O75264 130 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 ALBP02768 609 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 KRT15P19012 456 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 SCTRP47872 440 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 PIK3CGP48736 1102 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 AGTR2P50052 363 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 PCBP2Q15366 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNX25-204ENST00000506896 TBCCQ15814 346 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 ARHGEF39Q8N4T4 335 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 TTLQ8NG68 377 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 EPS8L3Q8TE67 593 aaKnown RBP18.91■□□□□ 0.62
SNX25-204ENST00000506896 WDR34Q96EX3 536 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 SEC16BQ96JE7 1060 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 ROPN1BQ9BZX4 212 aaPredicted RBP18.91■□□□□ 0.62
SNX25-204ENST00000506896 DRC3Q9H069 523 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 NT5DC2Q9H857 520 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 ROPN1Q9HAT0 212 aaPredicted RBP18.91■□□□□ 0.62
SNX25-204ENST00000506896 GEMIN8Q9NWZ8 242 aaKnown RBP18.91■□□□□ 0.62
SNX25-204ENST00000506896 CPSF2Q9P2I0 782 aaKnown RBP18.91■□□□□ 0.62
SNX25-204ENST00000506896 COPG2Q9UBF2 871 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 DCDC2Q9UHG0 476 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 TCFL5Q9UL49 500 aa18.91■□□□□ 0.62
SNX25-204ENST00000506896 SMIM23A6NLE4 172 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 STX16-NPEPL1H3BU86 382 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 STX16O14662 325 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 P2RX6O15547 441 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 PYGBP11216 843 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 EPB42P16452 691 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 RGS1Q08116 209 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 PCDH1Q08174 1060 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 LAPTM5Q13571 262 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 XKR6Q5GH73 641 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 PAGE2BQ5JRK9 111 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 MLIPQ5VWP3 458 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 MRPL14Q6P1L8 145 aaKnown RBP18.9■□□□□ 0.62
SNX25-204ENST00000506896 ZNF740Q8NDX6 193 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 TRPV3Q8NET8 790 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 PTCD3Q96EY7 689 aaKnown RBP18.9■□□□□ 0.62
SNX25-204ENST00000506896 EFCAB11Q9BUY7 163 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 SLC26A1Q9H2B4 701 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 ZNF304Q9HCX3 659 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 NXT1Q9UKK6 140 aaKnown RBP18.9■□□□□ 0.62
SNX25-204ENST00000506896 ASB1Q9Y576 335 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 ANGPTL3Q9Y5C1 460 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 ZNF462Q96JM2 2506 aa18.9■□□□□ 0.62
SNX25-204ENST00000506896 FER1L5A0AVI2 2057 aa18.89■□□□□ 0.62
SNX25-204ENST00000506896 GOLGA8RI6L899 631 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 NDUFS4O43181 175 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 ITGAXP20702 1163 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 VARSP26640 1264 aaKnown RBP18.89■□□□□ 0.61
SNX25-204ENST00000506896 CASP2P42575 452 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 IRF8Q02556 426 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 CDC20Q12834 499 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 E2F2Q14209 437 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 SLBPQ14493 270 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNX25-204ENST00000506896 RBBP5Q15291 538 aaKnown RBP18.89■□□□□ 0.61
SNX25-204ENST00000506896 UGT8Q16880 541 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 TMEM214Q6NUQ4 689 aaKnown RBP18.89■□□□□ 0.61
SNX25-204ENST00000506896 BORAQ6PGQ7 559 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 TMIGD1Q6UXZ0 262 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 OVCH1Q7RTY7 1134 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 PTGR2Q8N8N7 351 aaPredicted RBP18.89■□□□□ 0.61
SNX25-204ENST00000506896 COL26A1Q96A83 441 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 RUFY1Q96T51 708 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 ARHGAP9Q9BRR9 750 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 SPNS1Q9H2V7 528 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 WDR54Q9H977 334 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 SLC22A11Q9NSA0 550 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 SLC22A7Q9Y694 548 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 BAHCC1Q9P281 2608 aa18.89■□□□□ 0.61
SNX25-204ENST00000506896 A0A1W2PPM1 405 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 URADA6NGE7 173 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 GLRA3O75311 464 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 MED26O95402 600 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 FAM87AP0C7U9 286 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 EPORP19235 508 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 TAC1P20366 129 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 AVPR1BP47901 424 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 CHIT1Q13231 466 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 DSG2Q14126 1118 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 DOC2AQ14183 400 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 HIST2H2ACQ16777 129 aaPredicted RBP18.88■□□□□ 0.61
SNX25-204ENST00000506896 HIST2H2AA3Q6FI13 130 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 NIPAL1Q6NVV3 410 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 C16orf46Q6P387 395 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 TEX9Q8N6V9 391 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 NT5CQ8TCD5 201 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 UBE2E3Q969T4 207 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 TMEM216Q9P0N5 145 aa18.88■□□□□ 0.61
SNX25-204ENST00000506896 HELZ2Q9BYK8 2649 aaKnown RBP18.87■□□□□ 0.61
SNX25-204ENST00000506896 TLDC2A0PJX2 215 aa18.87■□□□□ 0.61
SNX25-204ENST00000506896 H0YIG0 161 aa18.87■□□□□ 0.61
SNX25-204ENST00000506896 E2F3O00716 465 aa18.87■□□□□ 0.61
SNX25-204ENST00000506896 KLF7O75840 302 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms