RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 VSNL1P62760 191 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CSNK1G2P78368 415 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 DLG1Q12959 904 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CDC16Q13042 620 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ERV3-1Q14264 604 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 HIST2H2ACQ16777 129 aaPredicted RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 ZXDCQ2QGD7 858 aaPredicted RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 TSNAXIP1Q2TAA8 658 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 MUM1Q2TAK8 710 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 PRTGQ2VWP7 1150 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 NKAIN1Q4KMZ8 207 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 GARNL3Q5VVW2 1013 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 HIST2H2AA3Q6FI13 130 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 EMBQ6PCB8 327 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 NXPE4Q6UWF7 544 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 TIFABQ6ZNK6 161 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SYVN1Q86TM6 617 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 LCA5Q86VQ0 697 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 KLHDC8AQ8IYD2 350 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 OR4N4Q8N0Y3 316 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 MFSD9Q8NBP5 474 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 KCTD4Q8WVF5 259 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SLC13A3Q8WWT9 602 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 STARD8Q92502 1023 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 EXT2Q93063 718 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 NEIL2Q969S2 332 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ISL2Q96A47 359 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 MVB12AQ96EY5 273 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CRELD1Q96HD1 420 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SCYL1Q96KG9 808 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 GBP5Q96PP8 586 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 AIF1LQ9BQI0 150 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SARGQ9BW04 601 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CD244Q9BZW8 370 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 PELI2Q9HAT8 420 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ZNF304Q9HCX3 659 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 BRD7Q9NPI1 651 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CUTCQ9NTM9 273 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 DNAJC11Q9NVH1 559 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 PSMC3IPQ9P2W1 217 aaPredicted RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 DHCR7Q9UBM7 475 aaKnown RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 IL17BQ9UHF5 180 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 PTBP2Q9UKA9 531 aaKnown RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 TMCO1Q9UM00 188 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 TNPO3Q9Y5L0 923 aaKnown RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 CHD8Q9HCK8 2581 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ACACBO00763 2458 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TRBC2A0A5B9 178 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 FEZF1A0PJY2 475 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ANKRD33BA6NCL7 494 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 URADA6NGE7 173 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 K7EPI3 171 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 UBXN8O00124 270 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TAPBPO15533 448 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 LCMT2O60294 686 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 NRP2O60462 931 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 CCNT2O60583 730 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 SMIM24O75264 130 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ONECUT2O95948 504 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 SERPIND1P05546 499 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 FAM157BP0CG42 384 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PRKAR1AP10644 381 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 WT1P19544 449 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 AHRP35869 848 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 MAGEA12P43365 314 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 AVPR1BP47901 424 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 HSPA7P48741 367 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 CSRP3P50461 194 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ALDH18A1P54886 795 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 CYP4F2P78329 520 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 IRF9Q00978 393 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 MEF2AQ02078 507 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 OCA2Q04671 838 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 RGS1Q08116 209 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 LAPTM5Q13571 262 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PWP1Q13610 501 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 FAM53BQ14153 422 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 UBAP2LQ14157 1087 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 SSPNQ14714 243 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 NCF4Q15080 339 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 RBBP5Q15291 538 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 PDK4Q16654 411 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PFKFB4Q16877 469 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ERCC6LQ2NKX8 1250 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 HKDC1Q2TB90 917 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PAGE2BQ5JRK9 111 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 CATSPEREQ5SY80 951 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 ATG9BQ674R7 924 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 LCN10Q6JVE6 187 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 NIPAL1Q6NVV3 410 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 BORAQ6PGQ7 559 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 OVCH1Q7RTY7 1134 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 LRRC70Q7Z2Q7 622 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TMPRSS11BQ86T26 416 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ASPGQ86U10 573 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PLD3Q8IV08 490 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 CENPLQ8N0S6 344 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 KRT78Q8N1N4 520 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms