RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 FHL5Q5TD97 284 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 B3GNTL1Q67FW5 361 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 TMEM205Q6UW68 189 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 LINC00696Q6ZRV3 163 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 ASPGQ86U10 573 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 MFSD9Q8NBP5 474 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 ABHD11Q8NFV4 315 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 TSNARE1Q96NA8 513 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 VN1R1Q9GZP7 353 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 LHPPQ9H008 270 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 MKKSQ9NPJ1 570 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 MKL2Q9ULH7 1088 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 CDC14AQ9UNH5 594 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 NOVA2Q9UNW9 492 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 ZGRF1Q86YA3 2104 aa15.83■□□□□ 0.12
PDLIM7-215ENST00000506161 LOC102723996A0A087X1L8 192 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 FAM187AA6NFU0 413 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 PHGDHO43175 533 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 PRAMEF4O60810 478 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 FAM155BO75949 473 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 NSA2O95478 260 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 F10P00742 488 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 PRR35P0CG20 571 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 ITGAMP11215 1152 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 SOX11P35716 441 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 GDF5P43026 501 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 ST13P50502 369 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 OLR1P78380 273 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 SRSF11Q05519 484 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 HYAL2Q12891 473 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 EFTUD2Q15029 972 aaKnown RBP eCLIP15.82■□□□□ 0.127e-13■■■□□ 19.1
PDLIM7-215ENST00000506161 TSNQ15631 228 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 PRAMEF9Q5VWM5 478 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 CAPN13Q6MZZ7 669 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 HPS6Q86YV9 775 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 SIRT6Q8N6T7 355 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 EFCAB3Q8N7B9 438 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 ANKRD53Q8N9V6 530 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 BRIX1Q8TDN6 353 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 SSC4DQ8WTU2 575 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 IMMP1LQ96LU5 166 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 RHOJQ9H4E5 214 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 PLA2G3Q9NZ20 509 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 WHRNQ9P202 907 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 RNF14Q9UBS8 474 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 G3BP2Q9UN86 482 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 CROCCQ5TZA2 2017 aa15.82■□□□□ 0.12
PDLIM7-215ENST00000506161 TCRBV9S1A1TA0A576 114 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 TAPBPO15533 448 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 VPS4BO75351 444 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 HEXBP07686 556 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 ANXA5P08758 320 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 VARSP26640 1264 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 AP1S2P56377 157 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 NR6A1Q15406 480 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 THOC6Q86W42 341 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 ZADH2Q8N4Q0 377 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 OR51Q1Q8NH59 317 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 SLC13A3Q8WWT9 602 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 BARD1Q99728 777 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 WDR77Q9BQA1 342 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 TMEM79Q9BSE2 394 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 SARGQ9BW04 601 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 PCBD2Q9H0N5 130 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 KLHL31Q9H511 634 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 LANCL2Q9NS86 450 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 C14orf105Q9NVL8 296 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 MAP10Q9P2G4 905 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 VPS4AQ9UN37 437 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 SLC22A14Q9Y267 594 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 NAALAD2Q9Y3Q0 740 aa15.81■□□□□ 0.12
PDLIM7-215ENST00000506161 NSG1A0A0A6YYJ2 146 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 H0YIG0 161 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 OR1F1O43749 312 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 CBX6O95503 412 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 ALPPP05187 535 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 HIST1H2AGP0C0S8 130 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 HIST1H2ADP20671 130 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 HRH2P25021 359 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 CASQ1P31415 396 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 XCR1P46094 333 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 GLRBP48167 497 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 REEP5Q00765 189 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 AGAP7PQ5VUJ5 663 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 ADNP2Q6IQ32 1131 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 NDUFAF7Q7L592 441 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 IQCKQ8N0W5 287 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 AFAP1L2Q8N4X5 818 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 CAMKVQ8NCB2 501 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 GABPB2Q8TAK5 448 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 FBXO25Q8TCJ0 367 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 PPP4R1Q8TF05 950 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 PYROXD1Q8WU10 500 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 SLC5A11Q8WWX8 675 aa15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-215ENST00000506161 TSLPQ969D9 159 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms