RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 B3GNTL1Q67FW5 361 aaPredicted RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 TRMT10BQ6PF06 316 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 MBOAT1Q6ZNC8 495 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 VN1R4Q7Z5H5 301 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 SLC26A11Q86WA9 606 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 NKAPQ8N5F7 415 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 MFSD9Q8NBP5 474 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ABHD11Q8NFV4 315 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 OR4K1Q8NGD4 311 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 HAS2Q92819 552 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 PYCR2Q96C36 320 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 VPS39Q96JC1 886 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 KRT12Q99456 494 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 BARD1Q99728 777 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 MESP1Q9BRJ9 268 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 TUBB6Q9BUF5 446 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ZNF700Q9H0M5 742 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 RIC8BQ9NVN3 520 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 TEKT2Q9UIF3 430 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 MRPS2Q9Y399 296 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 SLC22A7Q9Y694 548 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ZGRF1Q86YA3 2104 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 DIDO1Q9BTC0 2240 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 LOC102723996A0A087X1L8 192 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 A8MUI8 341 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 SGK494L7N484 410 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 TSPAN12O95859 305 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 SERPIND1P05546 499 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 CYC1P08574 325 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 XCR1P46094 333 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 SKP1P63208 163 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 EEF1A2Q05639 463 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 ACTN3Q08043 901 aaPredicted RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 PWP1Q13610 501 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 HERC3Q15034 1050 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 MAATS1Q7Z4T9 603 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 CPEB2Q7Z5Q1 589 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 STRA8Q7Z7C7 330 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 ZC3H7AQ8IWR0 971 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 KCT2Q8NC54 265 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 FBXO36Q8NEA4 188 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 OR56A3Q8NH54 315 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 FAR1Q8WVX9 515 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 PSMF1Q92530 271 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 FBXL8Q96CD0 374 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 TRIM51Q9BSJ1 452 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.31□□□□□ -0.6
MED28-203ENST00000503945 NSMCE4AQ9NXX6 385 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 PLA2G3Q9NZ20 509 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 C19orf25Q9UFG5 118 aaPredicted RBP11.31□□□□□ -0.6
MED28-203ENST00000503945 SLC5A6Q9Y289 635 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 CSAG2Q9Y5P2 127 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
MED28-203ENST00000503945 PCM1Q15154 2024 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 H2AFYO75367 372 aaKnown RBP11.3□□□□□ -0.6
MED28-203ENST00000503945 IL1RNP18510 177 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 PGGT1BP53609 377 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SLC12A2P55011 1212 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 MEF2AQ02078 507 aaPredicted RBP11.3□□□□□ -0.6
MED28-203ENST00000503945 CALCOCO2Q13137 446 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 NSDHLQ15738 373 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 ZXDCQ2QGD7 858 aaPredicted RBP11.3□□□□□ -0.6
MED28-203ENST00000503945 ABHD17BQ5VST6 288 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
MED28-203ENST00000503945 ZBED8Q8IZ13 594 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 ST6GALNAC3Q8NDV1 305 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 GRHL3Q8TE85 626 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 C5orf34Q96MH7 638 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 OLFM1Q99784 485 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SARGQ9BW04 601 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 VN1R1Q9GZP7 353 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 PLAC1Q9HBJ0 212 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 HCN3Q9P1Z3 774 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 SH2B3Q9UQQ2 575 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 NAALAD2Q9Y3Q0 740 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 DYRK1BQ9Y463 629 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 KCNE2Q9Y6J6 123 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
MED28-203ENST00000503945 POLEQ07864 2286 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 CNTRLQ7Z7A1 2325 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 LRBAP50851 2863 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms