RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 ANAPC2Q9UJX6 822 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 C7orf72A4D263 438 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 EPOPA6NHQ4 379 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 KAT7O95251 611 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ACPPP15309 386 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 CKMT2P17540 419 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 PSMC3P17980 439 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 FASP25445 335 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 S100A3P33764 101 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 PHC1P78364 1004 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 PCDH1Q08174 1060 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 GRHL2Q6ISB3 625 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 B3GNT6Q6ZMB0 384 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 THNSL2Q86YJ6 484 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 PAPD5Q8NDF8 572 aaKnown RBP11.17□□□□□ -0.62
USP46-204ENST00000503060 WDR20Q8TBZ3 569 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF514Q96K75 400 aaPredicted RBP11.17□□□□□ -0.62
USP46-204ENST00000503060 LINC00615Q96LM1 132 aaPredicted RBP11.17□□□□□ -0.62
USP46-204ENST00000503060 NSMCE2Q96MF7 247 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF583Q96ND8 569 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 SLC25A37Q9NYZ2 338 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 FADS3Q9Y5Q0 445 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 TRBV5-3A0A0A0MS03 114 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 TPST1O60507 370 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 FCGR1AP12314 374 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF8P17098 575 aaPredicted RBP11.17□□□□□ -0.62
USP46-204ENST00000503060 HNF4AP41235 474 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 CCR3P51677 355 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 CYP4F3Q08477 520 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 RUNDC3AQ59EK9 446 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 NOXRED1Q6NXP6 359 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZBTB49Q6ZSB9 765 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 MAMDC2Q7Z304 686 aaPredicted RBP11.17□□□□□ -0.62
USP46-204ENST00000503060 GALNTL5Q7Z4T8 443 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF547Q8IVP9 402 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 DTWD1Q8N5C7 304 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ZNF565Q8N9K5 539 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 CSGALNACT1Q8TDX6 532 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 TESCQ96BS2 214 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 ATAD3AQ9NVI7 634 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 MAN2B2Q9Y2E5 1009 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 GPR52Q9Y2T5 361 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
USP46-204ENST00000503060 FAM149AA5PLN7 773 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 SAC3D1A6NKF1 404 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 H0YIV9 168 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 LINC01565O15544 149 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 AP1G1O43747 822 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 VEGFDO43915 354 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ERN1O75460 977 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 GGT1P19440 569 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 GTDC1Q4AE62 458 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 PIP5KL1Q5T9C9 394 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 FAM46CQ5VWP2 391 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 C11orf88Q6PI97 169 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 RIMKLAQ8IXN7 391 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ST13P4Q8IZP2 240 aaPredicted RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ZNF480Q8WV37 535 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 CENPNQ96H22 339 aaPredicted RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 CNBD2Q96M20 576 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 THUMPD3Q9BV44 507 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 PAIP1Q9H074 479 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 KCNH6Q9H252 994 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ADNPQ9H2P0 1102 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 GPR34Q9UPC5 381 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 AP3M1Q9Y2T2 418 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 A0A096LPI6 279 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 GOSR1O95249 250 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ANXA6P08133 673 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 HSD3B1P14060 373 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 PTGS2P35354 604 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 GRIA2P42262 883 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 DDX39BQ13838 428 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 KRTCAP3Q53RY4 240 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 LRIF1Q5T3J3 769 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 TUBA3EQ6PEY2 450 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 CRTC3Q6UUV7 619 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 PACRGLQ8N7B6 248 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 PLA2G15Q8NCC3 412 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 OR2T12Q8NG77 320 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 HM13Q8TCT9 377 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 ITCHQ96J02 903 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 CCDC115Q96NT0 180 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 HHIPQ96QV1 700 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 MYADMQ96S97 322 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms