RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CRADDP78560 199 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 ADORA2A-AS1P86434 159 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 RHAGQ02094 409 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 DHX34Q14147 1143 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 TESK1Q15569 626 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 CYP1B1Q16678 543 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 BTBD16Q32M84 506 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 QSOX2Q6ZRP7 698 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 ASPGQ86U10 573 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 CNTN4Q8IWV2 1026 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 GHDCQ8N2G8 530 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 TAB3Q8N5C8 712 aaPredicted RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 C7orf57Q8NEG2 295 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 TRIM58Q8NG06 486 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 GIMAP7Q8NHV1 300 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 C16orf52Q8NHV5 167 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 CD200R1Q8TD46 325 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 ANKRD7Q92527 254 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 MTFMTQ96DP5 389 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 PDLIM5Q96HC4 596 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 SEC16BQ96JE7 1060 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 PRAP1Q96NZ9 151 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 DMRTA2Q96SC8 542 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 NPAS2Q99743 824 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 UTP23Q9BRU9 249 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 TRIM51Q9BSJ1 452 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 HAUS8Q9BT25 410 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 CCDC68Q9H2F9 335 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 PARVBQ9HBI1 364 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC24A3Q9HC58 644 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 ANKHQ9HCJ1 492 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 PLSCR2Q9NRY7 297 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 LANCL2Q9NS86 450 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 SAMD15Q9P1V8 674 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 STOX2Q9P2F5 926 aaPredicted RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 GALPQ9UBC7 116 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 RUVBL2Q9Y230 463 aaKnown RBP5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 FBN2P35556 2912 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 SCN3AQ9NY46 2000 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 PCNX1Q96RV3 2341 aa5.75□□□□□ -1.49
LSM3P4-201ENST00000502948 TCRBV7S3A2A0A539 114 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CTAGE9A4FU28 777 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 KRT87PA6NCN2 255 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 URADA6NGE7 173 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 FOXO6A8MYZ6 492 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ASNA1O43681 348 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 NME2P1O60361 137 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 GALR3O60755 368 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SEC24DO94855 1032 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 TTC4O95801 387 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 FGGP02679 453 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 FHP07954 510 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SP1P08047 785 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CELA2AP08217 269 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ENO2P09104 434 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ESRRAP11474 423 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 NPPBP16860 134 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 IGFBP2P18065 325 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 NME2P22392 152 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 GSTM2P28161 218 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 AHRP35869 848 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CYB561P49447 251 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 RGS4P49798 205 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC26A5P58743 744 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 TBPL1P62380 186 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 MAT1AQ00266 395 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ILF2Q12905 390 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SNX1Q13596 522 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 THOC5Q13769 683 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 USP10Q14694 798 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 OR1C1Q15619 314 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 NSDHLQ15738 373 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 C3AR1Q16581 482 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SYT16Q17RD7 645 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 DUPD1Q68J44 220 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF470Q6ECI4 717 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC25A25Q6KCM7 469 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CAPN13Q6MZZ7 669 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF549Q6P9A3 640 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 PAPD4Q6PIY7 484 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 AGTRAPQ6RW13 159 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 LANCL3Q6ZV70 420 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 UBE2R2Q712K3 238 aaPredicted RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 GSTA5Q7RTV2 222 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 PRUNE1Q86TP1 453 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 RPS19BP1Q86WX3 136 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 PDSS2Q86YH6 399 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CRLF3Q8IUI8 442 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 CHERPQ8IWX8 916 aaKnown RBP5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 PRSS58Q8IYP2 241 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF295-AS1Q8N0V1 137 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 BEST3Q8N1M1 668 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 RASGEF1CQ8N431 466 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 TBC1D19Q8N5T2 526 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 OTUD6BQ8N6M0 293 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 MFSD9Q8NBP5 474 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 PPFIBP2Q8ND30 876 aa5.74□□□□□ -1.49
LSM3P4-201ENST00000502948 OR9A4Q8NGU2 314 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms