RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 TRAPPC10P48553 1259 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 FNTAP49354 379 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GPC3P51654 580 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 NAPAP54920 295 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 NR1H2P55055 460 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 UCNP55089 124 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GSCP56915 257 aaPredicted RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 CLDN2P57739 230 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 EEF1A1P68104 462 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 KRT83P78385 493 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ZBED6P86452 979 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 UBXN1Q04323 297 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 CKAP4Q07065 602 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 ELAVL2Q12926 359 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 ZNF234Q14588 700 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 EDRF1Q3B7T1 1238 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ITPRIPL2Q3MIP1 535 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 TTC31Q49AM3 519 aaPredicted RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 MAP9Q49MG5 647 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 HSP90B2PQ58FF3 399 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 DNAJC21Q5F1R6 531 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 TECRLQ5HYJ1 363 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 SPDYCQ5MJ68 293 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 EEF1A1P5Q5VTE0 462 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 TTI2Q6NXR4 508 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GBP6Q6ZN66 633 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 MMS22LQ6ZRQ5 1243 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GLRX5Q86SX6 157 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 TADA2BQ86TJ2 420 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 NOXA1Q86UR1 476 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ARID3BQ8IVW6 561 aaPredicted RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 CCDC170Q8IYT3 715 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 RNF168Q8IYW5 571 aaPredicted RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 DAW1Q8N136 415 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 C1orf131Q8NDD1 294 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 DDHD1Q8NEL9 900 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 OR52I2Q8NH67 350 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ZNF461Q8TAF7 563 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 NOC3LQ8WTT2 800 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 NELFBQ8WX92 580 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 RLN3Q8WXF3 142 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 JAKMIP2Q96AA8 810 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 TCEAL4Q96EI5 215 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 MTMR9Q96QG7 549 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ERGIC2Q96RQ1 377 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 TWNKQ96RR1 684 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 MTERF1Q99551 399 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 SYT11Q9BT88 431 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 FGFBP2Q9BYJ0 223 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 FAM107BQ9H098 131 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 BLZF1Q9H2G9 400 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 KCNN2Q9H2S1 579 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 POLD4Q9HCU8 107 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 XPNPEP1Q9NQW7 623 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ASAH2Q9NR71 780 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 SMYD2Q9NRG4 433 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 RBM28Q9NW13 759 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 RMND1Q9NWS8 449 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GEMIN8Q9NWZ8 242 aaKnown RBP2.89□□□□□ -1.95
PROM1-203ENST00000502943 BCCIPQ9P287 314 aaKnown RBP eCLIP2.89□□□□□ -1.95
PROM1-203ENST00000502943 GUCA1BQ9UMX6 200 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 SNX12Q9UMY4 172 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 GDAQ9Y2T3 454 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 JRKLQ9Y4A0 524 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 SAR1BQ9Y6B6 198 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 ATG2BQ96BY7 2078 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 CFAP46Q8IYW2 2715 aa2.89□□□□□ -1.95
PROM1-203ENST00000502943 SF3B1O75533 1304 aaKnown RBP eCLIP2.89□□□□□ -1.95
PROM1-203ENST00000502943 CACNA1DQ01668 2161 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 NUP205Q92621 2012 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 ERICH2A1L162 156 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 TRIM49BA6NDI0 452 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 ARL5CA6NH57 179 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 ANKRD65E5RJM6 399 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 IPO5O00410 1097 aaKnown RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 TRDMT1O14717 391 aaKnown RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 EIF3HO15372 352 aaKnown RBP eCLIP2.88□□□□□ -1.95
PROM1-203ENST00000502943 FFAR2O15552 330 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 SYNGR3O43761 229 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 MYL1P05976 194 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 CALM1P0DP23 149 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 CALM2P0DP24 149 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 CALM3P0DP25 149 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 GJA1P17302 382 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 XBP1P17861 261 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 CYLC1P35663 651 aaPredicted RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 LONP1P36776 959 aaKnown RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 PRPHP41219 470 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 TNNT3P45378 269 aaPredicted RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 GTF2A1P52655 376 aaPredicted RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 ARPP19P56211 112 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 AKAP17AQ02040 695 aaKnown RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 ZNF33AQ06730 810 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 FCHO2Q0JRZ9 810 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 RUNX3Q13761 415 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 TEAD2Q15562 447 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 SMAD1Q15797 465 aaKnown RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 PFKFB4Q16877 469 aa2.88□□□□□ -1.95
PROM1-203ENST00000502943 ASTE1Q2TB18 679 aaPredicted RBP2.88□□□□□ -1.95
PROM1-203ENST00000502943 TUBB8Q3ZCM7 444 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms