RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 KCNJ16Q9NPI9 418 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 FAM221AA4D161 298 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 E7ENX8 843 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 H3BMM5 538 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 ZWINTO95229 277 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 PYGBP11216 843 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 MSX1P28360 303 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-207ENST00000498466 CYB561P49447 251 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 SESN2P58004 480 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-207ENST00000498466 OR4D2P58180 307 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 SLC26A5P58743 744 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 CRADDP78560 199 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TAP2Q03519 686 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TFF3Q07654 80 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 MYBPHQ13203 477 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TBX2Q13207 712 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-207ENST00000498466 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 VN1R4Q7Z5H5 301 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-207ENST00000498466 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 CHDHQ8NE62 594 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-207ENST00000498466 LILRB4Q8NHJ6 448 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 ZCCHC10Q8TBK6 192 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 RND1Q92730 232 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 GALPQ9UBC7 116 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 KCNN3Q9UGI6 736 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
CCDC58-207ENST00000498466 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 E5RI56 91 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PFDN6O15212 129 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 KIF5CO60282 957 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PRMT3O60678 531 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 RDH16O75452 317 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 TOXO94900 526 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 ESR1P03372 595 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 NMBRP28336 390 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 RFC3P40938 356 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 MEOX1P50221 254 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 ITGA8P53708 1063 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 RPS15AP62244 130 aaKnown RBP13.08□□□□□ -0.32
CCDC58-207ENST00000498466 RHAGQ02094 409 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 KCNJ11Q14654 390 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 RNF187Q5TA31 235 aaPredicted RBP13.08□□□□□ -0.32
CCDC58-207ENST00000498466 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PCGF5Q86SE9 256 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 TGIF2LYQ8IUE0 185 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 TSLPQ969D9 159 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PEX11GQ96HA9 241 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 FOXC2Q99958 501 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
CCDC58-207ENST00000498466 CRYL1Q9Y2S2 319 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
CCDC58-207ENST00000498466 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
CCDC58-207ENST00000498466 SCN2AQ99250 2005 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 MAGEB17A8MXT2 336 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 GOLGA8KD6RF30 607 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 GOLGA8TH3BQL2 631 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 HS6ST1O60243 411 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 VAPBO95292 243 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 IPO7O95373 1038 aaKnown RBP13.07□□□□□ -0.32
CCDC58-207ENST00000498466 HOXD4P09016 255 aaPredicted RBP13.07□□□□□ -0.32
CCDC58-207ENST00000498466 DRD2P14416 443 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 ETS1P14921 441 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 TFEBP19484 476 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 KLK2P20151 261 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 FOLH1Q04609 750 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 PDSS2Q86YH6 399 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 CCDC71Q8IV32 467 aaPredicted RBP13.07□□□□□ -0.32
CCDC58-207ENST00000498466 REXO1L1PQ8IX06 675 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC58-207ENST00000498466 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 CAMKVQ8NCB2 501 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 ELP5Q8TE02 316 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 PANX2Q96RD6 677 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 IL22Q9GZX6 179 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 CXXC4Q9H2H0 198 aa13.07□□□□□ -0.32
CCDC58-207ENST00000498466 TP63Q9H3D4 680 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms