RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 IKZF3Q9UKT9 509 aa8.03□□□□□ -1.12
HMGXB4-207ENST00000498212 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-207ENST00000498212 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
HMGXB4-207ENST00000498212 COPG1Q9Y678 874 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-207ENST00000498212 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-207ENST00000498212 LOC102723996A0A087X1L8 192 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 A0A1W2PQ72 361 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 TRBC2A0A5B9 178 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 NPEPPSL1A6NEC2 478 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SGK494L7N484 410 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CDC7O00311 574 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 EIF3HO15372 352 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 RAD51CO43502 376 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 OR1F1O43749 312 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 JRKO75564 520 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 KLHL18O94889 574 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 AGFG2O95081 481 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SERPINA7P05543 415 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 UQCRHP07919 91 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CYC1P08574 325 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 C8orf89P0DMQ9 161 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SSTR1P30872 391 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CASQ1P31415 396 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 XCR1P46094 333 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC12A2P55011 1212 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 TAS2R39P59534 338 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 AP2B1P63010 937 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 MRPS25P82663 173 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CDKL1Q00532 357 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 C2orf54Q08AI8 447 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ILF2Q12905 390 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CDC16Q13042 620 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 MFAP5Q13361 173 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 MRPL49Q13405 166 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CSHL1Q14406 222 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF460Q14592 562 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF169Q14929 603 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 PCOLCEQ15113 449 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 NR6A1Q15406 480 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 PPP1R3AQ16821 1122 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 MINDY4Q4G0A6 757 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CRB2Q5IJ48 1285 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CATSPEREQ5SY80 951 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 TMEM205Q6UW68 189 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 LINC00696Q6ZRV3 163 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 RIPOR1Q6ZS17 1223 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 FRA10AC1Q70Z53 315 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 OR4K1Q8NGD4 311 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 OR51Q1Q8NH59 317 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 PRR7Q8TB68 274 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 BRIX1Q8TDN6 353 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 METTL21AQ8WXB1 218 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ANKRD7Q92527 254 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 CDKL2Q92772 493 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 NEIL2Q969S2 332 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 VPS39Q96JC1 886 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 TSNARE1Q96NA8 513 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 EGFL8Q99944 293 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ERP44Q9BS26 406 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SARGQ9BW04 601 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 VN1R1Q9GZP7 353 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF700Q9H0M5 742 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 RHOJQ9H4E5 214 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 POPDC3Q9HBV1 291 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SAYSD1Q9NPB0 183 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 HCN3Q9P1Z3 774 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 PTGFRNQ9P2B2 879 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 TXNDC16Q9P2K2 825 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 DYRK1BQ9Y463 629 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 OARD1Q9Y530 152 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC22A7Q9Y694 548 aa8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGXB4-207ENST00000498212 RELNP78509 3460 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 DYTNA2CJ06 578 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 BLACEA4D250 179 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 NDUFS4O43181 175 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 RDH16O75452 317 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 PIAS1O75925 651 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 WFS1O76024 890 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SERPIND1P05546 499 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ICAM2P13598 275 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 AHRP35869 848 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 TSFMP43897 325 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 AGTR2P50052 363 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 EFNA3P52797 238 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ARG2P78540 354 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 POU4F1Q01851 419 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 PWP1Q13610 501 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ELOAQ14241 798 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 HERC3Q15034 1050 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 TLR1Q15399 786 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 EIF2S3LQ2VIR3 472 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 B3GNTL1Q67FW5 361 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 TMPRSS11BQ86T26 416 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 ADAMTSL2Q86TH1 951 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 THOC6Q86W42 341 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 PDSS2Q86YH6 399 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 CEP97Q8IW35 865 aa8.01□□□□□ -1.13
HMGXB4-207ENST00000498212 SIRT6Q8N6T7 355 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms