RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SIX1Q15475 284 aaPredicted RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 MED22Q15528 200 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 CBWD6Q4V339 395 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 CMPK2Q5EBM0 449 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 CBWD3Q5JTY5 395 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 C1orf220Q5T0J3 134 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 GFI1BQ5VTD9 330 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 SNX30Q5VWJ9 437 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 PMS2CLQ68D20 193 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 KCTD16Q68DU8 428 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 PPP1R21Q6ZMI0 780 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 C15orf39Q6ZRI6 1047 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 KCTD8Q6ZWB6 473 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 DSG4Q86SJ6 1040 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 SDCCAG8Q86SQ7 713 aaPredicted RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 APLFQ8IW19 511 aaPredicted RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 KLHL7Q8IXQ5 586 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 PM20D2Q8IYS1 436 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 KATNAL2Q8IYT4 538 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 CCDC89Q8N998 374 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 SLC38A9Q8NBW4 561 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 FBXL13Q8NEE6 735 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 OR8K5Q8NH50 307 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 FBXO25Q8TCJ0 367 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 UTP15Q8TED0 518 aaKnown RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 RAPGEF5Q92565 580 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 MAGOHBQ96A72 148 aaKnown RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 ZBED3Q96IU2 234 aaPredicted RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 GDAP1L1Q96MZ0 367 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 TTC25Q96NG3 672 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 WDFY2Q96P53 400 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 MYCBPQ99417 103 aaPredicted RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 PSMB7Q99436 277 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 SEMA3CQ99985 751 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 ZNF577Q9BSK1 485 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 TRMT61BQ9BVS5 477 aaKnown RBP4.55□□□□□ -1.68
SSR3-209ENST00000498205 CSTL1Q9H114 145 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 NEUROG2Q9H2A3 272 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 LRMDAQ9H2I8 198 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 BATF3Q9NR55 127 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 HAUS2Q9NVX0 235 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 MTMR10Q9NXD2 777 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 EURLQ9NYK6 297 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 PADI3Q9ULW8 664 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 ZNF711Q9Y462 761 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 PIAS3Q9Y6X2 628 aa4.55□□□□□ -1.68
SSR3-209ENST00000498205 IGSF9BQ9UPX0 1349 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 OR5K3A6NET4 321 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 RSPH10B2B2RC85 870 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TRAFD1O14545 582 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 LIN7AO14910 233 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 XPNPEP2O43895 674 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ECE2O60344 883 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 SNX3O60493 162 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 LSM8O95777 96 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 GH2P01242 217 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ATP5BP06576 529 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 SRPRAP08240 638 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 RSPH10BP0C881 870 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 CYP11B1P15538 503 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 IVDP26440 423 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 NMT1P30419 496 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 CETN2P41208 172 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 RPL21P46778 160 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 CLCN3P51790 818 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ISL1P61371 349 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 DCAF7P61962 342 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 IFT88Q13099 833 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 PRPF4BQ13523 1007 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 RBBP5Q15291 538 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 SNCBQ16143 134 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 PARP6Q2NL67 630 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ODF2Q5BJF6 829 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ZNF628Q5EBL2 1059 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 OR7E24Q6IFN5 339 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 CYB5D1Q6P9G0 228 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 KLHL35Q6PF15 583 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 CCDC137Q6PK04 289 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 C19orf48Q6RUI8 117 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 C4orf50Q6ZRC1 276 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TPRG1Q6ZUI0 275 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 IKBIPQ70UQ0 350 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 OTUD6AQ7L8S5 288 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TRPM8Q7Z2W7 1104 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 MIER3Q7Z3K6 550 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 HAUS6Q7Z4H7 955 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 SLC9B2Q86UD5 537 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TMPRSS12Q86WS5 348 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 VSIG1Q86XK7 387 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 PHF13Q86YI8 300 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 SYCP3Q8IZU3 236 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TMEM161BQ8NDZ6 487 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ACVR1CQ8NER5 493 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 EXD1Q8NHP7 514 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ZNF564Q8TBZ8 553 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 SLC38A5Q8WUX1 472 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 UBLCP1Q8WVY7 318 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 USP6NLQ92738 828 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 ATP6V0A1Q93050 837 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms