RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 FGF5P12034 268 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 TSPAN8P19075 237 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF10P21506 573 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 ID4P47928 161 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 YBX1P67809 324 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 OCRLQ01968 901 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 MEF2AQ02078 507 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 CYP4F3Q08477 520 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 FAM214AQ32MH5 1076 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 TMEM35AQ53FP2 167 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 SH2D4BQ5SQS7 431 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 PRAMEF9Q5VWM5 478 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 KANK2Q63ZY3 851 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 CHSY3Q70JA7 882 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.79■□□□□ 0.287e-7■■□□□ 12.7
CTDSP1-215ENST00000498160 WDR20Q8TBZ3 569 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 NT5CQ8TCD5 201 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 SELENOMQ8WWX9 145 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF501Q96CX3 271 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 CDK15Q96Q40 435 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 SERPINI1Q99574 410 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 DDA1Q9BW61 102 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 IRAK4Q9NWZ3 460 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 VTI1BQ9UEU0 232 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF225Q9UK10 706 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 FEZF1A0PJY2 475 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 FITM1A5D6W6 292 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 H0YGG7 62 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 MANBAO00462 879 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 UBFD1O14562 309 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 OR2B3O76000 313 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 CHRNGP07510 517 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 FOLR1P15328 257 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 PTX3P26022 381 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 VSX2P58304 361 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 ARF3P61204 181 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 FOXM1Q08050 763 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 TARDBPQ13148 414 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 IGF2-ASQ6U949 168 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 CSNK1A1LQ8N752 337 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF473Q8WTR7 871 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 USP7Q93009 1102 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 TM4SF19Q96DZ7 209 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 METTL2AQ96IZ6 378 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 OR6C1Q96RD1 312 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 TAAR9Q96RI9 348 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 AHSPQ9NZD4 102 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF490Q9ULM2 529 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
CTDSP1-215ENST00000498160 ADAMTS20P59510 1910 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SLC28A1O00337 649 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 PPP6CO00743 305 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 CASC3O15234 703 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 NDUFS4O43181 175 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 LCMT2O60294 686 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SEMA3DO95025 777 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 CUL3Q13618 768 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 MUM1Q2TAK8 710 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 WASHC2DQ5SRD0 308 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 DCAF12Q5T6F0 453 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 ABHD13Q7L211 337 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 VN1R4Q7Z5H5 301 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 PLD3Q8IV08 490 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 WDR75Q8IWA0 830 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 BMPERQ8N8U9 685 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 ANKRD53Q8N9V6 530 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF740Q8NDX6 193 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 HUS1BQ8NHY5 278 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 PIWIL2Q8TC59 973 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 MVB12AQ96EY5 273 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SORT1Q99523 831 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SIKE1Q9BRV8 207 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 NRSN2Q9GZP1 204 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SPNS1Q9H2V7 528 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 POLR1BQ9H9Y6 1135 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 CLK4Q9HAZ1 481 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 DMRT3Q9NQL9 472 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 PCDHGA3Q9Y5H0 932 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 SLC22A7Q9Y694 548 aa16.77■□□□□ 0.28
CTDSP1-215ENST00000498160 WDR87Q6ZQQ6 2873 aa16.77■□□□□ 0.27
CTDSP1-215ENST00000498160 TRPC5OSA6NMA1 111 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 FFAR3O14843 346 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 GPR42O15529 346 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 RGS14O43566 566 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 ITM2AO43736 263 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 LYPLA1O75608 230 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 CD82P27701 267 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 FAM53BQ14153 422 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 KCNAB1Q14722 419 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 HERC3Q15034 1050 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 GPR19Q15760 415 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 PRTGQ2VWP7 1150 aa16.76■□□□□ 0.27
CTDSP1-215ENST00000498160 DEFB110Q30KQ9 67 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms