RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MAGEB16A2A368 324 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 ZNF839A8K0R7 811 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 ZBTB14O43829 449 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 LCMT2O60294 686 aaKnown RBP17.52■□□□□ 0.4
PRKCB-209ENST00000498058 SEC24DO94855 1032 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-209ENST00000498058 IL1RNP18510 177 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 TBPL1P62380 186 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 CSNK1G2P78368 415 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 THEMIS2Q5TEJ8 643 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 RELTQ969Z4 430 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 CYTH2Q99418 400 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 TSPYL1Q9H0U9 437 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 C20orf96Q9NUD7 363 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-209ENST00000498058 TMEM184CQ9NVA4 438 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 HCN3Q9P1Z3 774 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 MTRF1LQ9UGC7 380 aaKnown RBP17.52■□□□□ 0.4
PRKCB-209ENST00000498058 PDE10AQ9Y233 779 aa17.52■□□□□ 0.4
PRKCB-209ENST00000498058 FEZF1A0PJY2 475 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 SGK494L7N484 410 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 TXNDC9O14530 226 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 NSA2O95478 260 aaKnown RBP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 TUBBP07437 444 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 C8orf89P0DMQ9 161 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 ENO3P13929 434 aaPredicted RBP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 GABRB3P28472 473 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 BCL6P41182 706 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 PLTPP55058 493 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 ARL4CP56559 192 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 PER3P56645 1201 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 PMP22Q01453 160 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 HSP90AA5PQ58FG0 334 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 FCRLBQ6BAA4 426 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 SP5Q6BEB4 398 aaPredicted RBP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 TMEM214Q6NUQ4 689 aaKnown RBP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 PDSS2Q86YH6 399 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 PDIK1LQ8N165 341 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 KCT2Q8NC54 265 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 OR51Q1Q8NH59 317 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 EEF1AKMT1Q8WVE0 214 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 TM4SF19Q96DZ7 209 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 NDNQ99608 321 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 NPAS2Q99743 824 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 TUBB6Q9BUF5 446 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 RNF32Q9H0A6 362 aa17.51■□□□□ 0.39
PRKCB-209ENST00000498058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 UTP6Q9NYH9 597 aaKnown RBP17.51■□□□□ 0.39
PRKCB-209ENST00000498058 ABCA12Q86UK0 2595 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 KCNE1BA0A087WTH5 132 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 A0A1B0GUH1 482 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 ARHGAP10A1A4S6 786 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 H0YIG0 161 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 MAN1A2O60476 641 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 DNAJB6O75190 326 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 BANF1O75531 89 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 GRNP28799 593 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 AVPR1BP47901 424 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 PGGT1BP53609 377 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 INAQ16352 499 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 NDUFA9Q16795 377 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 RBM20Q5T481 1227 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 CPEB2Q7Z5Q1 589 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 SRRM1Q8IYB3 904 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 EIF1ADQ8N9N8 165 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 ZCCHC10Q8TBK6 192 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 EBNA1BP2Q99848 306 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 ATG10Q9H0Y0 220 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 CCDC68Q9H2F9 335 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 CCDC177Q9NQR7 707 aaPredicted RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 IARS2Q9NSE4 1012 aaKnown RBP17.5■□□□□ 0.39
PRKCB-209ENST00000498058 STMN3Q9NZ72 180 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 GRHL1Q9NZI5 618 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 MAD1L1Q9Y6D9 718 aa17.5■□□□□ 0.39
PRKCB-209ENST00000498058 PCNX1Q96RV3 2341 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 CSMD1Q96PZ7 3565 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 OR5H15A6NDH6 313 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 XCR1P46094 333 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 RPS15AP62244 130 aaKnown RBP17.49■□□□□ 0.39
PRKCB-209ENST00000498058 ZNF33BQ06732 778 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 PHKG1Q16816 387 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 GFRALQ6UXV0 394 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 ANKRD37Q7Z713 158 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 SLC26A11Q86WA9 606 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 ITLN2Q8WWU7 325 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-209ENST00000498058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRKCB-209ENST00000498058 MARVELD3Q96A59 401 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 UNKQ9C0B0 810 aaKnown RBP17.49■□□□□ 0.39
PRKCB-209ENST00000498058 ABI3Q9P2A4 366 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 ENTPD4Q9Y227 616 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 FBN2P35556 2912 aa17.49■□□□□ 0.39
PRKCB-209ENST00000498058 APCP25054 2843 aa17.48■□□□□ 0.39
PRKCB-209ENST00000498058 A8MUI8 341 aa17.48■□□□□ 0.39
PRKCB-209ENST00000498058 PRAMEF2O60811 474 aa17.48■□□□□ 0.39
PRKCB-209ENST00000498058 UNC5CO95185 931 aa17.48■□□□□ 0.39
PRKCB-209ENST00000498058 RASAL1O95294 804 aa17.48■□□□□ 0.39
PRKCB-209ENST00000498058 CDKN2DP55273 166 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms