RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SRSF5Q13243 272 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 TOB2Q14106 344 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 KRT31Q15323 416 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SYT14P1Q58G82 188 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 Q5PR19 223 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 DUS1LQ6P1R4 473 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 DLK2Q6UY11 383 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 CBLL1Q75N03 491 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ARHGAP22Q7Z5H3 698 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 GCNT2Q8N0V5 402 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 RYBPQ8N488 228 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ARRDC2Q8TBH0 407 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SAP25Q8TEE9 199 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 TAAR8Q969N4 342 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ULK4Q96C45 1275 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF333Q96JL9 665 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SENP8Q96LD8 212 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 BTBD9Q96Q07 612 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NTMT1Q9BV86 223 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 PKIBQ9C010 78 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SLA2Q9H6Q3 261 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NPAP1Q9NZP6 1156 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 MALT1Q9UDY8 824 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 RUVBL2Q9Y230 463 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.74□□□□□ -1.497e-6■■□□□ 12.1
BRCA1-224ENST00000497488 PLEKHG1Q9ULL1 1385 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 IQSEC2Q5JU85 1478 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NRXN3Q9Y4C0 1643 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NWD1Q149M9 1564 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 A0A075B6Q4 140 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 DPPA5A6NC42 116 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 HELTA6NFD8 242 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 LINC00473A8K010 186 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 A8MUI8 341 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 B4DGG1 531 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 H7C1Q1 480 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 SLC22A2O15244 555 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 UGDHO60701 494 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 DDNO94850 711 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 CHRNGP07510 517 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 STAG3L1P0CL83 205 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 ITGAMP11215 1152 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 KRT3P12035 628 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 S1PR1P21453 382 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 TNFSF8P32971 234 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 RFC2P35250 354 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PIGAP37287 484 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 NUMBP49757 651 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 CCT8P50990 548 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 GP2P55259 537 aaKnown RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 TMPRSS3P57727 454 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 RPS8P62241 208 aaKnown RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 RELQ04864 619 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 SULT2A1Q06520 285 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PNRC1Q12796 327 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PLA2G7Q13093 441 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PHYHD1Q5SRE7 291 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 ARMC12Q5T9G4 340 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 IL23RQ5VWK5 629 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 RGMBQ6NW40 437 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 B3GNT6Q6ZMB0 384 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 Q6ZSN1 163 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 ANKRD33Q7Z3H0 272 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 FAM228AQ86W67 206 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 TMPRSS12Q86WS5 348 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 CHPT1Q8WUD6 406 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 ASB10Q8WXI3 467 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 SMPDL3BQ92485 455 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 FAM168AQ92567 244 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 INPP5DQ92835 1189 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 DACT3Q96B18 629 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PYCR2Q96C36 320 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 MYEOVQ96EZ4 313 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 C11orf24Q96F05 449 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 BTBD10Q9BSF8 475 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 FAM234AQ9H0X4 552 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 FOXP1Q9H334 677 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 DCLRE1BQ9H816 532 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 FN3KRPQ9HA64 309 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 MOV10Q9HCE1 1003 aaKnown RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 AGPAT5Q9NUQ2 364 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 RDH8Q9NYR8 311 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 VPS54Q9P1Q0 977 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 TNNQ9UQP3 1299 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 LAMP3Q9UQV4 416 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 NIP7Q9Y221 180 aaKnown RBP eCLIP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 MRPS33Q9Y291 106 aaKnown RBP5.73□□□□□ -1.49
BRCA1-224ENST00000497488 SLC4A4Q9Y6R1 1079 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 PTPRUQ92729 1446 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 MAST3O60307 1309 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 KIF16BQ96L93 1317 aa5.73□□□□□ -1.49
BRCA1-224ENST00000497488 XIRP1Q702N8 1843 aaKnown RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 OR2M5A3KFT3 312 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 KCNU1A8MYU2 1149 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 TMEM150CB9EJG8 249 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 F8VVB4 439 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 F8VWA3 439 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 MS4A18H0YCH9 400 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms