RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 GPR141Q7Z602 305 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCDC25Q86WR0 208 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM173Q86WV6 379 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 MARCH9Q86YJ5 346 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 FOXRED2Q8IWF2 684 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 CHERPQ8IWX8 916 aaKnown RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RASGEF1CQ8N431 466 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF611Q8N823 705 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR52E1Q8NGJ3 308 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RASSF8Q8NHQ8 419 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 EXOC6Q8TAG9 804 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 HM13Q8TCT9 377 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RNASE8Q8TDE3 154 aaKnown RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 DQX1Q8TE96 717 aaKnown RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 WFIKKN2Q8TEU8 576 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 NSMAFQ92636 917 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 APBB2Q92870 758 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RIT1Q92963 219 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ST6GALNAC6Q969X2 333 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 SARAFQ96BY9 339 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF689Q96CS4 500 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPDL1Q96EA4 605 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 C12orf42Q96LP6 360 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RASL10BQ96S79 203 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ADOQ96SZ5 270 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 PKP4Q99569 1192 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF577Q9BSK1 485 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 HAUS8Q9BT25 410 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 IDI2Q9BXS1 227 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 NUF2Q9BZD4 464 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCSER1Q9C0I3 900 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 B3GNT4Q9C0J1 378 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ISCUQ9H1K1 167 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 AKIRIN1Q9H9L7 192 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 MYNNQ9NPC7 610 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 TCP11L1Q9NUJ3 509 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF701Q9NV72 531 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 TAS2R14Q9NYV8 317 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 CPSF3Q9UKF6 684 aaKnown RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ADAM21Q9UKJ8 722 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 DNPEPQ9ULA0 475 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 AURKCQ9UQB9 309 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 RRP15Q9Y3B9 282 aaKnown RBP2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 AP1M2Q9Y6Q5 423 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 DENND4AQ7Z401 1863 aa2.34□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZMYM6O95789 1325 aa2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 ADGRA3Q8IWK6 1321 aa2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATXN2Q99700 1313 aaKnown RBP2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 SCN10AQ9Y5Y9 1956 aa2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 ROCK2O75116 1388 aaKnown RBP2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF469Q96JG9 3925 aaPredicted RBP2.34□□□□□ -2.04
CKS1BP2-201ENST00000497342 ADAMTS9Q9P2N4 1935 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR2M5A3KFT3 312 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 HIDE1A8MVS5 230 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRR32B1ATL7 298 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANHXE9PGG2 379 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MDM4O15151 490 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLDN3O15551 220 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 FLRT2O43155 660 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC25A17O43808 307 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SSX5O60225 188 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PROP1O75360 226 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 GCATO75600 419 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF202O95125 648 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NFATC1O95644 943 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 LATS1O95835 1130 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 WDPCPO95876 746 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 LDLRP01130 860 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TPM2P07951 284 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CYC1P08574 325 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ETS1P14921 441 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 AREGP15514 252 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ITGB6P18564 788 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 OTX2P32243 289 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTGER4P35408 488 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCNJ1P48048 391 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 GLIPR1P48060 266 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC9A3P48764 834 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TDO2P48775 406 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 HNMTP50135 292 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 HNRNPH2P55795 449 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CSNK2A1P68400 391 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 IRX4P78413 519 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 RUNX1T1Q06455 604 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 FOXI1Q12951 378 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAD2L1Q13257 205 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SCGB2A2Q13296 93 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 LAMB3Q13751 1172 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PDE7AQ13946 482 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 BTG3Q14201 252 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NEDD9Q14511 834 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CDSNQ15517 529 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRIP6Q15654 476 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TAZQ16635 292 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTGISQ16647 500 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 IQCCQ4KMZ1 466 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MIDNQ504T8 468 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MIIPQ5JXC2 388 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ENTPD8Q5MY95 495 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZDHHC20Q5W0Z9 365 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms