RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RPL5P46777 297 aaKnown RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 TPTEP56180 551 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ATP5IP56385 69 aaPredicted RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 SOX8P57073 446 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 C21orf59P57076 290 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2B6P58173 313 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CXCR4P61073 352 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 DGCR2P98153 550 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ACSM1Q08AH1 577 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RIPPLY1Q0D2K3 151 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 SELENBP1Q13228 472 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 TFDP1Q14186 410 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 HEPACAMQ14CZ8 416 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CEBPEQ15744 281 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB30Q15771 203 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 DCAF6Q58WW2 860 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CT83Q5H943 113 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 WASHC2DQ5SRD0 308 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 LDLRAP1Q5SW96 308 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RNLSQ5VYX0 342 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RESP18Q5W5W9 173 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 TANGO2Q6ICL3 276 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 NAPEPLDQ6IQ20 393 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 RPL13AP3Q6NVV1 102 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 LINC00696Q6ZRV3 163 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PGAP1Q75T13 922 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CYB5R4Q7L1T6 521 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 AMZ2Q86W34 360 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PLD3Q8IV08 490 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC71Q8IV32 467 aaPredicted RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 LYSMD2Q8IV50 215 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 FOXRED2Q8IWF2 684 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 KATNAL2Q8IYT4 538 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 UNC5BQ8IZJ1 945 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF561Q8N587 486 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 AOPEPQ8N6M6 819 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PAPD5Q8NDF8 572 aaKnown RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 OR5D18Q8NGL1 313 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 OR4C15Q8NGM1 316 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PSMA8Q8TAA3 256 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 THAP4Q8WY91 577 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CFHR4Q92496 578 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 NXPE2Q96DL1 559 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 BSCL2Q96G97 398 aaPredicted RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 C10orf90Q96M02 699 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPINB11Q96P15 392 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 GAL3ST4Q96RP7 486 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 MXRA8Q9BRK3 442 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 SOX7Q9BT81 388 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 CACNG6Q9BXT2 260 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 PRRG3Q9BZD7 231 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 OR52A5Q9H2C5 316 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 SPNS1Q9H2V7 528 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ADAP2Q9NPF8 381 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF302Q9NR11 478 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ARHGEF3Q9NR81 526 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ZCCHC3Q9NUD5 404 aaKnown RBP3□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC38A7Q9NVC3 462 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ING3Q9NXR8 418 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 B4GALT6Q9UBX8 382 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 MLXQ9UH92 298 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 NAGKQ9UJ70 344 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 SNX24Q9Y343 169 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTL7AQ9Y615 435 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 UMODL1Q5DID0 1318 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 WDR17Q8IZU2 1322 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 MSH6P52701 1360 aa3□□□□□ -1.93
SNRNP48-202ENST00000496946 NCOA1Q15788 1441 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RIMS2Q9UQ26 1411 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 BCORL1Q5H9F3 1711 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NCOA2Q15596 1464 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TRABD2BA6NFA1 517 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 METTL15A6NJ78 407 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SIGLEC16A6NMB1 481 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF487B1APH4 448 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 E7ESA3 106 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OPHN1O60890 802 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ATP2C2O75185 946 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ECI2O75521 394 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 BCAR3O75815 825 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TOX4O94842 621 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 F10P00742 488 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OAS1P00973 400 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 IFNA2P01563 188 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 IGHV2-70P01814 119 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 FTLP02792 175 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ERBB2P04626 1255 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 S100A8P05109 93 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GUSBP08236 651 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SPARCP09486 303 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NQO2P16083 231 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NDUFB7P17568 137 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SRMP19623 302 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OGNP20774 298 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF10P21506 573 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DTYMKP23919 212 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PTPN3P26045 913 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CST5P28325 142 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 EPHA8P29322 1005 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PPP2R1BP30154 601 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms