RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TMEM214Q6NUQ4 689 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 SLCO4C1Q6ZQN7 724 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 PTCD3Q96EY7 689 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 MMABQ96EY8 250 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 GPR78Q96P69 363 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 ADNPQ9H2P0 1102 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 MRPL46Q9H2W6 279 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 NT5DC2Q9H857 520 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 SYNPO2LQ9H987 977 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 ANKHQ9HCJ1 492 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 SLC22A11Q9NSA0 550 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 ANGPTL3Q9Y5C1 460 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 SLC22A7Q9Y694 548 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 MAU2Q9Y6X3 613 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 FAM208BQ5VWN6 2430 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 SEC16AO15027 2179 aa18.31■□□□□ 0.52
CTDSP1-213ENST00000496785 MDC1Q14676 2089 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 SMIM24O75264 130 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 NSA2O95478 260 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 MTHFD2P13995 350 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 EPB42P16452 691 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 RRADP55042 308 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 NFKB2Q00653 900 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 IRF8Q02556 426 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 IL10RAQ13651 578 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 HERC3Q15034 1050 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 RASA2Q15283 850 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 NKG7Q16617 165 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 ATP1A1-AS1Q5TC04 95 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 TMIGD1Q6UXZ0 262 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 ABHD13Q7L211 337 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 ARHGEF39Q8N4T4 335 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 METTL27Q8N6F8 245 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 NT5CQ8TCD5 201 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 UBE2E3Q969T4 207 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 MRPL57Q9BQC6 102 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 MKKSQ9NPJ1 570 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 CPSF2Q9P2I0 782 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 TUBD1Q9UJT1 453 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 MAP4K5Q9Y4K4 846 aa18.3■□□□□ 0.52
CTDSP1-213ENST00000496785 LAMA5O15230 3695 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 ZFHX4Q86UP3 3567 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 A0A0A6YYC8 382 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 I3L1I5 382 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 PEX12O00623 359 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 FOXS1O43638 330 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 KLK8O60259 260 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 CDH16O75309 829 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 RFPL1O75677 317 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 SERPIND1P05546 499 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 SLBPQ14493 270 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 NAA30Q147X3 362 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 TBCCQ15814 346 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 PFKFB4Q16877 469 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 FBXO48Q5FWF7 155 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 XKR6Q5GH73 641 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 COX15Q7KZN9 410 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 PLD6Q8N2A8 252 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 ZNF740Q8NDX6 193 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 ADAMTS17Q8TE56 1095 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 ESAMQ96AP7 390 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 MIEF2Q96C03 454 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 WDR34Q96EX3 536 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 GEMIN8Q9NWZ8 242 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 COPG2Q9UBF2 871 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 XPR1Q9UBH6 696 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 TRPC4Q9UBN4 977 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 KCNMB2Q9Y691 235 aa18.29■□□□□ 0.52
CTDSP1-213ENST00000496785 IGLV3-12A0A075B6K2 115 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 ANKDD1BA6NHY2 528 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 PCDH17O14917 1159 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 MED26O95402 600 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 SERPINA6P08185 405 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 GSTA1P08263 222 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 FURINP09958 794 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 VARSP26640 1264 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 OTX2P32243 289 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 HSD17B3P37058 310 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 CASP2P42575 452 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 POLE2P56282 527 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 STXBP1P61764 594 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 PCDH1Q08174 1060 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 PCBP2Q15366 365 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■□□ 18.1
CTDSP1-213ENST00000496785 LINC00303Q3SY05 128 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 MED25Q71SY5 747 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 APLFQ8IW19 511 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 TMEM102Q8N9M5 508 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 ZCCHC10Q8TBK6 192 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 STT3BQ8TCJ2 826 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 SLC39A7Q92504 469 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 SPSB2Q99619 263 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 YIPF2Q9BWQ6 316 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 SPNS1Q9H2V7 528 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 SEMA3GQ9NS98 782 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 CTSFQ9UBX1 484 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 TBK1Q9UHD2 729 aa18.28■□□□□ 0.52
CTDSP1-213ENST00000496785 G3BP2Q9UN86 482 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms